Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.27□□□□□ -1.41
VTA1Q9NP79 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VTA1Q9NP79 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VTA1Q9NP79 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 VN2R3P-201ENST00000422626 1412 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VTA1Q9NP79 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VTA1Q9NP79 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VTA1Q9NP79 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
VTA1Q9NP79 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VTA1Q9NP79 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VTA1Q9NP79 RNU6-636P-201ENST00000384598 107 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 RNU2-22P-201ENST00000411266 212 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 TCEA1P4-201ENST00000415066 844 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC005033.1-201ENST00000428904 813 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 MTCO1P52-201ENST00000433928 531 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC073410.1-201ENST00000435125 589 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AL596266.1-201ENST00000448132 400 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 OTX2P1-201ENST00000450956 354 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 SLC25A51P1-201ENST00000468432 871 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 RN7SL826P-201ENST00000479724 288 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 NDUFA5P12-201ENST00000503796 343 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AP001804.1-201ENST00000526868 919 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC022832.1-201ENST00000530718 645 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VTA1Q9NP79 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC125494.2-201ENST00000602431 657 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 HIRAP1-201ENST00000605318 787 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 AL133481.2-203ENST00000607558 139 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC092954.1-201ENST00000609121 445 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC126915.2-201ENST00000610957 190 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC015660.5-201ENST00000623238 564 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 AP003485.2-201ENST00000623636 610 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC009039.2-201ENST00000624524 529 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 LINC01808-202ENST00000641680 1116 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VTA1Q9NP79 RLIMP2-201ENST00000427891 1563 ntBASIC6.26□□□□□ -1.41
VTA1Q9NP79 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VTA1Q9NP79 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.26□□□□□ -1.41
VTA1Q9NP79 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 AC015799.1-201ENST00000622996 3122 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VTA1Q9NP79 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VTA1Q9NP79 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VTA1Q9NP79 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VTA1Q9NP79 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 MIR133B-201ENST00000362210 119 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 RPL23AP17-201ENST00000401064 499 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 RN7SKP213-201ENST00000410746 298 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 RNU4-22P-201ENST00000411058 166 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 RNGTTP1-201ENST00000420965 728 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 AC108075.1-201ENST00000424692 529 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 MTCYBP42-201ENST00000444653 1130 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 CASP3P1-201ENST00000446037 609 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 AC244505.3-201ENST00000454598 187 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 AP006245.2-201ENST00000522004 300 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 PMS2P3-207ENST00000529061 717 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 AC023824.3-201ENST00000569003 562 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms