Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AC015864.1-201ENST00000496512 544 ntBASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 VWA8P1-201ENST00000510889 176 ntBASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AC008759.1-201ENST00000589783 983 ntBASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AL137072.1-201ENST00000603444 466 ntBASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AC087783.2-201ENST00000605070 562 ntBASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AC020634.1-201ENST00000608701 549 ntBASIC4.36□□□□□ -1.71
HMG20AQ9NP66 RMST_9.1-201ENST00000619945 193 ntBASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AC012414.7-202ENST00000622705 1090 ntBASIC4.36□□□□□ -1.71
HMG20AQ9NP66 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AL445487.1-201ENST00000415694 1580 ntBASIC4.36□□□□□ -1.71
HMG20AQ9NP66 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.36□□□□□ -1.71
HMG20AQ9NP66 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 MIR323A-201ENST00000362199 86 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 SNORD74.4-201ENST00000364129 80 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 RNA5SP242-201ENST00000364171 118 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 EI24P4-201ENST00000423683 1078 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 NANOGP6-201ENST00000429190 847 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 RPL7L1P9-201ENST00000431298 745 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 BX119904.1-201ENST00000432026 348 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 SPRYD7P1-201ENST00000443861 570 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 SEPT14P1-201ENST00000458703 648 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 RPS17P2-201ENST00000461663 408 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 RPL23AP2-201ENST00000471227 466 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 AC108693.1-201ENST00000496068 432 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 UGT2A3P7-201ENST00000510485 734 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 Y_RNA.719-201ENST00000517156 106 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 AC104687.2-201ENST00000604442 342 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 AC079395.2-201ENST00000610982 737 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 AC109309.2-201ENST00000612597 332 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 MIR6837-201ENST00000620884 64 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 AC136428.4-201ENST00000634254 1155 ntBASIC4.35□□□□□ -1.71
HMG20AQ9NP66 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.35□□□□□ -1.71
HMG20AQ9NP66 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.34□□□□□ -1.71
HMG20AQ9NP66 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMG20AQ9NP66 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
HMG20AQ9NP66 AC018529.3-201ENST00000624212 2254 ntBASIC4.34□□□□□ -1.71
HMG20AQ9NP66 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HMG20AQ9NP66 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMG20AQ9NP66 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.34□□□□□ -1.71
HMG20AQ9NP66 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMG20AQ9NP66 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
HMG20AQ9NP66 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HMG20AQ9NP66 RNA5SP183-201ENST00000362452 119 ntBASIC4.34□□□□□ -1.71
HMG20AQ9NP66 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HMG20AQ9NP66 MIR600-201ENST00000385007 98 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms