Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 MTHFD2P5-201ENST00000320415 844 ntBASIC5.16□□□□□ -1.58
NXF3Q9H4D5 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 AC097523.2-201ENST00000435551 652 ntBASIC5.16□□□□□ -1.58
NXF3Q9H4D5 RPL35AP21-201ENST00000437667 333 ntBASIC5.16□□□□□ -1.58
NXF3Q9H4D5 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 RN7SL346P-201ENST00000491561 294 ntBASIC5.16□□□□□ -1.58
NXF3Q9H4D5 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 AL049830.4-201ENST00000555149 351 ntBASIC5.16□□□□□ -1.58
NXF3Q9H4D5 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.16□□□□□ -1.58
NXF3Q9H4D5 AC012414.7-202ENST00000622705 1090 ntBASIC5.16□□□□□ -1.58
NXF3Q9H4D5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.16□□□□□ -1.58
NXF3Q9H4D5 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.15□□□□□ -1.58
NXF3Q9H4D5 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
NXF3Q9H4D5 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.15□□□□□ -1.58
NXF3Q9H4D5 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
NXF3Q9H4D5 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NXF3Q9H4D5 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.15□□□□□ -1.58
NXF3Q9H4D5 Z95331.1-201ENST00000623075 23112 ntBASIC5.15□□□□□ -1.58
NXF3Q9H4D5 AC133552.1-201ENST00000569988 4007 ntBASIC5.15□□□□□ -1.58
NXF3Q9H4D5 AC104623.2-202ENST00000623477 4002 ntBASIC5.15□□□□□ -1.58
NXF3Q9H4D5 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NXF3Q9H4D5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NXF3Q9H4D5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
NXF3Q9H4D5 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AL050305.1-201ENST00000399993 1230 ntBASIC5.15□□□□□ -1.59
NXF3Q9H4D5 OR51B3P-201ENST00000412287 913 ntBASIC5.15□□□□□ -1.59
NXF3Q9H4D5 GLUD1P9-201ENST00000420997 1173 ntBASIC5.15□□□□□ -1.59
NXF3Q9H4D5 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AL451139.1-201ENST00000434718 346 ntBASIC5.15□□□□□ -1.59
NXF3Q9H4D5 TCEA1P3-201ENST00000443005 880 ntBASIC5.15□□□□□ -1.59
NXF3Q9H4D5 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 OR52A4P-201ENST00000472867 958 ntBASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 AC127024.5-201ENST00000580085 462 ntBASIC5.15□□□□□ -1.59
NXF3Q9H4D5 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.15□□□□□ -1.59
NXF3Q9H4D5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NXF3Q9H4D5 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 DHX40P1-201ENST00000588725 1412 ntBASIC5.14□□□□□ -1.59
NXF3Q9H4D5 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 AC126755.2-208ENST00000327792 462 ntBASIC5.14□□□□□ -1.59
NXF3Q9H4D5 AC138969.1-213ENST00000331436 462 ntBASIC5.14□□□□□ -1.59
NXF3Q9H4D5 RNU6-249P-201ENST00000363016 102 ntBASIC5.14□□□□□ -1.59
NXF3Q9H4D5 RPS3AP23-201ENST00000401762 784 ntBASIC5.14□□□□□ -1.59
NXF3Q9H4D5 AL591848.1-201ENST00000413092 322 ntBASIC5.14□□□□□ -1.59
NXF3Q9H4D5 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 DNAJC19P7-201ENST00000428811 344 ntBASIC5.14□□□□□ -1.59
NXF3Q9H4D5 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 MORF4L2P1-201ENST00000503761 858 ntBASIC5.14□□□□□ -1.59
NXF3Q9H4D5 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 C1GALT1P3-201ENST00000522049 819 ntBASIC5.14□□□□□ -1.59
NXF3Q9H4D5 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 RN7SL652P-201ENST00000577769 300 ntBASIC5.14□□□□□ -1.59
NXF3Q9H4D5 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.14□□□□□ -1.59
NXF3Q9H4D5 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms