Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 ZNF652P1-201ENST00000442420 1309 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 TLK1P1-201ENST00000456760 2440 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AL731566.1-201ENST00000620490 1937 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 RLIMP2-201ENST00000427891 1563 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 ARL4AP5-201ENST00000404372 599 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 NPM1P40-201ENST00000412758 733 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AC114755.2-201ENST00000413520 361 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 E2F6P2-201ENST00000420708 748 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 RPL36AP10-201ENST00000421785 322 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 MTCO1P51-201ENST00000427672 1060 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 RPS26P4-201ENST00000431743 355 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 HMGB3P10-201ENST00000434734 572 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AC112498.1-201ENST00000444401 332 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 MTND6P32-201ENST00000457611 483 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 BUD31P1-201ENST00000521828 359 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 FKBP1BP1-201ENST00000553366 325 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AC093249.4-201ENST00000564755 259 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 OR1F2P-201ENST00000570470 933 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 RN7SL802P-201ENST00000577858 299 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AC024940.4-201ENST00000605507 246 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AC006840.1-201ENST00000623069 542 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 SOCS5P3-201ENST00000425115 1576 ntBASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCSER1Q9C0I3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AL359922.3-201ENST00000624779 1670 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 RNU6-1320P-201ENST00000390838 107 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 RNU6-1269P-201ENST00000391139 107 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 U3.30-201ENST00000391308 210 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 MIR937-201ENST00000401271 86 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AC004938.1-201ENST00000438468 308 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AL031584.1-201ENST00000447169 754 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AURKAPS2-201ENST00000454983 333 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 RNU6-599P-201ENST00000459383 107 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 RNU6-1193P-201ENST00000459461 107 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AC107015.1-201ENST00000466902 747 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AC138938.1-201ENST00000515431 782 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AC087477.6-201ENST00000559595 843 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 MIR5699-201ENST00000578903 90 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 MIR4472-2-201ENST00000582069 67 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AC022726.1-201ENST00000587475 207 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AL049539.1-201ENST00000611964 459 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 RNU6-368P-201ENST00000620928 107 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 RNU6-538P-201ENST00000622329 107 ntBASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms