Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 AL034370.1-201ENST00000397254 1590 ntBASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC007996.1-201ENST00000620414 2821 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 RNU1-32P-201ENST00000363937 159 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 GTF2IP5-201ENST00000414608 731 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 HSPE1P16-201ENST00000426640 348 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 RPL5P22-201ENST00000480199 884 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 HPRT1P1-201ENST00000509498 657 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AL390334.1-201ENST00000556395 450 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC107993.1-201ENST00000591343 684 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC010424.2-201ENST00000607594 443 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC091905.4-201ENST00000623432 202 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC243960.7-201ENST00000623532 707 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 SOCS5P3-201ENST00000425115 1576 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 AC099654.2-201ENST00000433031 1980 ntBASIC5.75□□□□□ -1.49
UPF3BQ9BZI7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 INTS6P1-201ENST00000504674 2530 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 AL021331.1-201ENST00000402817 582 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 ARL4AP5-201ENST00000404372 599 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 AC002524.1-201ENST00000411687 547 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 RPL34P6-201ENST00000432390 345 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 TDGF1P1-201ENST00000445734 527 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 AC092905.1-201ENST00000467527 949 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 STRADBP1-201ENST00000478954 1281 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 Y_RNA.719-201ENST00000517156 106 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 MORF4L1P3-201ENST00000525966 950 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 SNORA74C-1-201ENST00000580726 201 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 AL020997.2-201ENST00000602607 184 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 ZNF652P1-201ENST00000442420 1309 ntBASIC5.74□□□□□ -1.49
UPF3BQ9BZI7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 TCP1P3-201ENST00000414406 1498 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 NR1H5P-201ENST00000452683 1377 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 RNA5SP123-201ENST00000363244 119 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 MIR1271-201ENST00000408537 86 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 DNAJC19P7-201ENST00000428811 344 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 AC004938.1-201ENST00000438468 308 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 MTCYBP21-201ENST00000443300 1113 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 RNA5SP103-201ENST00000459503 118 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 RPS4XP12-201ENST00000461747 709 ntBASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.73□□□□□ -1.49
UPF3BQ9BZI7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms