Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AF228730.7-203ENST00000641436 1804 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 RNU1-21P-201ENST00000363327 163 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 RNU6-99P-201ENST00000364721 107 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 SSXP10-201ENST00000402595 565 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 MIR1272-201ENST00000408106 129 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 RNA5SP345-201ENST00000410646 108 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AL049758.1-201ENST00000423154 397 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 CHIAP3-201ENST00000423668 1133 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC093151.1-201ENST00000427711 313 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 BRWD1P3-201ENST00000428816 390 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 KRTAP9-11P-201ENST00000431013 525 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 NRBF2P3-201ENST00000432731 865 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC010881.1-201ENST00000433830 235 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AL022721.1-201ENST00000436521 505 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC016734.1-201ENST00000436998 654 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AL133351.3-201ENST00000454998 193 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 RPL5P30-201ENST00000465511 891 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 RPL7L1P8-201ENST00000469911 741 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC090453.1-201ENST00000495560 436 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AK3P4-201ENST00000504283 583 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC109811.2-201ENST00000509609 452 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC097460.2-201ENST00000511857 741 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 RNU6-406P-201ENST00000516470 107 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC079598.4-201ENST00000549647 265 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 ULK4P3-201ENST00000563895 440 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC053481.3-201ENST00000577881 843 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 MIR3146-201ENST00000580367 79 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC105224.1-201ENST00000587055 421 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 ACP5-208ENST00000590420 301 ntTSL 5 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC010323.2-201ENST00000596405 594 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AL670379.11-201ENST00000604059 253 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AL670379.10-201ENST00000604330 253 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AL670379.12-201ENST00000605291 253 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AL670379.9-201ENST00000605428 253 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC062037.2-201ENST00000610137 73 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC138627.2-201ENST00000624202 601 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC092111.1-201ENST00000618256 3358 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 NRK-204ENST00000540278 1687 ntTSL 2 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 EFTUD1P2-201ENST00000514817 1603 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC096921.2-201ENST00000561507 1916 ntBASIC7.11□□□□□ -1.27
USB1Q9BQ65 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC7.11□□□□□ -1.27
USB1Q9BQ65 AC006600.2-201ENST00000624834 2506 ntBASIC7.1□□□□□ -1.27
USB1Q9BQ65 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USB1Q9BQ65 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USB1Q9BQ65 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USB1Q9BQ65 PNPT1P2-201ENST00000456768 2050 ntBASIC7.1□□□□□ -1.27
USB1Q9BQ65 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.1□□□□□ -1.27
USB1Q9BQ65 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USB1Q9BQ65 AC245100.2-201ENST00000454544 1679 ntBASIC7.1□□□□□ -1.27
USB1Q9BQ65 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USB1Q9BQ65 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.1□□□□□ -1.27
USB1Q9BQ65 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
USB1Q9BQ65 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.1□□□□□ -1.27
USB1Q9BQ65 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USB1Q9BQ65 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USB1Q9BQ65 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
USB1Q9BQ65 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USB1Q9BQ65 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USB1Q9BQ65 RNU6-552P-201ENST00000362869 119 ntBASIC7.1□□□□□ -1.27
USB1Q9BQ65 RNA5SP394-201ENST00000364216 119 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms