Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 SNORD35A-201ENST00000363389 86 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 Y_RNA.197-201ENST00000364004 102 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 RNA5SP141-201ENST00000364543 120 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 MIR187-201ENST00000385062 109 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 MT-TG-201ENST00000387429 68 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 SNORD37.1-201ENST00000390968 65 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 RNY4P36-201ENST00000391116 96 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 U3.23-201ENST00000391132 200 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 MTCYBP4-201ENST00000401524 249 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 CNN3P1-201ENST00000401596 935 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 AP000534.2-201ENST00000412729 568 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 CBX1P4-201ENST00000439415 457 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC118758.1-202ENST00000454719 225 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 RPS15AP1-201ENST00000457423 391 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 RN7SL74P-201ENST00000464966 299 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 RN7SL418P-201ENST00000473031 287 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 RPS16P9-201ENST00000477220 427 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 RN7SL849P-201ENST00000485236 295 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 RN7SL568P-201ENST00000493069 298 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC091885.1-201ENST00000506658 268 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 IGHVIII-67-3-201ENST00000517650 232 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC087360.1-201ENST00000518788 616 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC022634.1-201ENST00000520765 532 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 OR5BN1P-201ENST00000532955 829 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 SNRPGP18-201ENST00000553000 214 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 MIR4503-201ENST00000582187 83 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 MAGOH2P-202ENST00000584384 429 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 AL355598.1-201ENST00000604169 202 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
PHOX2BQ99453 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 USP9YP4-201ENST00000424401 1745 ntBASIC7.69□□□□□ -1.18
PHOX2BQ99453 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PHOX2BQ99453 THUMPD3P1-201ENST00000506556 1480 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 HSPA8P18-201ENST00000439846 1928 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC067945.1-201ENST00000342609 618 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 RNU4-1-201ENST00000363925 141 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 RNA5SP435-201ENST00000364044 108 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 RNU6-744P-201ENST00000365557 107 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHOX2BQ99453 RNU6-444P-201ENST00000383988 108 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 RNU6-1316P-201ENST00000384242 108 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 RNU6-574P-201ENST00000384265 107 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AL031679.1-201ENST00000400616 525 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 RNU6-193P-201ENST00000410977 107 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC134879.1-201ENST00000426062 394 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 RPS26P40-201ENST00000435209 294 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 AL512882.1-201ENST00000436086 832 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 RPL23AP74-201ENST00000437246 471 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.68□□□□□ -1.18
PHOX2BQ99453 RPL36AP15-201ENST00000444514 266 ntBASIC7.68□□□□□ -1.18
PHOX2BQ99453 AC002381.1-201ENST00000447049 280 ntBASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms