Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 ABCC5-201ENST00000265586 5712 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 PPIAP22-201ENST00000358455 498 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AL031577.2-201ENST00000404133 280 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 NENFP1-201ENST00000419476 466 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC245884.2-201ENST00000426257 404 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 RANP2-201ENST00000456833 229 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 snoU13.1-201ENST00000459157 104 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC011005.2-201ENST00000487324 359 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC021146.2-201ENST00000504736 556 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AL133457.1-201ENST00000564251 987 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AL158211.1-201ENST00000566763 763 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC010738.1-201ENST00000604970 987 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC099676.1-201ENST00000608886 657 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC007742.2-201ENST00000618226 398 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC009039.2-201ENST00000624524 529 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 MAPK10-344ENST00000641718 3746 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 ZNF275-202ENST00000370251 6320 ntTSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MBP-206ENST00000397863 4800 ntTSL 3 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 OPCML-207ENST00000541867 6277 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 OPCML-208ENST00000612177 6250 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 GAPDHP42-201ENST00000406848 981 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 ELOCP17-201ENST00000414751 326 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MTCO3P41-201ENST00000414801 328 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC069213.2-201ENST00000420238 366 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 Z68868.1-201ENST00000429048 544 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MTND1P33-201ENST00000446251 917 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 SEPT7P3-201ENST00000455017 621 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL022319.1-201ENST00000458183 1167 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 NAP1L1P3-201ENST00000462291 880 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC068781.1-201ENST00000488231 618 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 FTH1P8-201ENST00000498161 514 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 Y_RNA.685-201ENST00000516532 108 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 OR8K4P-201ENST00000534608 872 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC011611.5-201ENST00000552477 578 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 ANP32BP3-201ENST00000559213 706 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC127024.5-201ENST00000580085 462 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 RPS11-202ENST00000594493 575 ntTSL 3 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL591167.1-201ENST00000607321 456 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL133215.3-201ENST00000609801 448 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL442067.1-201ENST00000613261 223 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 AL118522.2-201ENST00000616045 615 ntBASIC1.84□□□□□ -2.11
HMCN1Q96RW7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms