Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC109583.2-201ENST00000617367 129 ntBASIC4.81□□□□□ -1.64
PTP4A1Q93096 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.81□□□□□ -1.64
PTP4A1Q93096 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.81□□□□□ -1.64
PTP4A1Q93096 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.81□□□□□ -1.64
PTP4A1Q93096 AC091948.2-201ENST00000636510 279 ntBASIC4.81□□□□□ -1.64
PTP4A1Q93096 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PTP4A1Q93096 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.81□□□□□ -1.64
PTP4A1Q93096 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PTP4A1Q93096 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTP4A1Q93096 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTP4A1Q93096 LINC01109-201ENST00000603837 3081 ntBASIC4.81□□□□□ -1.64
PTP4A1Q93096 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.81□□□□□ -1.64
PTP4A1Q93096 USP9YP4-201ENST00000424401 1745 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 AC022893.2-201ENST00000564832 3296 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 AC000123.3-201ENST00000624029 4975 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 RN7SKP15-201ENST00000364742 309 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 RNU4-2-201ENST00000365668 141 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 PTP4A1P3-201ENST00000433661 420 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 AC019185.1-201ENST00000442718 389 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 GEMIN8P3-201ENST00000445417 720 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 PPIAP19-201ENST00000486414 492 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 MTND6P2-201ENST00000512226 524 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 HMGB1P19-201ENST00000517578 577 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 AC022790.1-201ENST00000522872 204 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 AC114947.2-201ENST00000565748 2125 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 RN7SL356P-201ENST00000582228 248 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 AC008521.2-201ENST00000591021 259 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 PPATP2-201ENST00000605635 508 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 AC004775.1-201ENST00000607389 753 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.8□□□□□ -1.64
PTP4A1Q93096 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTP4A1Q93096 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PTP4A1Q93096 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 MTND4P21-201ENST00000453886 1357 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC104623.2-202ENST00000623477 4002 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC120338.1-201ENST00000625074 1541 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 TMSB4XP4-201ENST00000323496 618 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTP4A1Q93096 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AL031985.1-201ENST00000392713 418 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 UBE2V1P11-201ENST00000411559 285 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC010385.1-201ENST00000412374 256 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 XKRYP4-201ENST00000414395 483 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 SUMO2P3-201ENST00000438311 288 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 RPL12P11-201ENST00000439970 501 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.79□□□□□ -1.64
PTP4A1Q93096 AP000281.1-201ENST00000444036 316 ntBASIC4.79□□□□□ -1.64
PTP4A1Q93096 SUMO2P1-206ENST00000445436 284 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms