Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 OR13C1P-202ENST00000641378 2919 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC104118.1-201ENST00000607625 1589 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 GAPDHP15-201ENST00000398586 975 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AP000580.1-201ENST00000404439 358 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 Z86062.1-201ENST00000406773 777 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 RNA5SP146-201ENST00000410743 123 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 RANP4-201ENST00000413361 655 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC073508.1-201ENST00000428866 656 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 CLNS1AP1-201ENST00000435954 682 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 DEFB109F-201ENST00000491870 277 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 RN7SL441P-201ENST00000492388 296 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 RNA5SP373-201ENST00000517271 95 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC027176.2-201ENST00000559166 746 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC116553.2-201ENST00000564203 463 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC005242.1-201ENST00000585658 438 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 MTCO3P22-201ENST00000603219 784 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 MTCO2P22-201ENST00000603246 681 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC007423.1-201ENST00000605009 627 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AP001005.3-201ENST00000622049 129 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 AC135068.12-201ENST00000637370 931 ntBASIC4.29□□□□□ -1.72
BEST4Q8NFU0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.29□□□□□ -1.72
BEST4Q8NFU0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 SSXP3-201ENST00000442971 1300 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 AC023490.2-201ENST00000359859 470 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 RNA5SP335-201ENST00000363817 110 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 RNA5SP28-201ENST00000363841 119 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 BMS1P3-201ENST00000372011 932 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 SNORA2.3-201ENST00000383920 135 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 RNU6-31P-201ENST00000384388 108 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 MIR137-201ENST00000385223 102 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 AL512422.1-201ENST00000407033 553 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.28□□□□□ -1.72
BEST4Q8NFU0 MORF4L1P7-201ENST00000426038 703 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 EIF2S2P3-201ENST00000428356 999 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 AL606490.7-201ENST00000433136 191 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 AC002504.1-201ENST00000438281 691 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 AL450263.2-201ENST00000439400 589 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 MTCYBP21-201ENST00000443300 1113 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 Z80107.2-201ENST00000445127 392 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 AL353718.1-201ENST00000451028 517 ntBASIC4.28□□□□□ -1.72
BEST4Q8NFU0 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms