Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 CCT8P1-201ENST00000413611 1657 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 COX6B1P3-201ENST00000312310 260 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 TMSB4XP2-201ENST00000335179 210 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 SNORD1C-201ENST00000363315 78 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AL356131.1-201ENST00000405826 414 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AL512422.1-201ENST00000407033 553 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 RN7SKP166-201ENST00000410812 305 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 Y_RNA.619-201ENST00000410951 90 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 RNU4-22P-201ENST00000411058 166 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AL158825.1-201ENST00000414735 521 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 IPPKP1-201ENST00000422501 768 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 ETF1P3-201ENST00000430422 1160 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AL354710.1-201ENST00000453641 246 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 PTGES3P5-201ENST00000455109 434 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 CBX1P5-201ENST00000475330 559 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC147055.3-201ENST00000510547 851 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC010625.1-201ENST00000511296 403 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 RN7SKP288-201ENST00000516227 268 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC079905.1-201ENST00000549280 475 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 MRPS35P3-201ENST00000603189 709 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC090525.3-201ENST00000605601 189 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC004492.1-201ENST00000607036 742 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 RMST_10.1-201ENST00000616309 154 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 MIR6886-201ENST00000619864 61 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 AC006927.3-201ENST00000638789 384 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 OR8B1P-202ENST00000641132 1178 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 GTF2H2B-203ENST00000508065 1432 ntBASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIMC1Q8NDZ2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 SNORD56.4-201ENST00000363883 71 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 SNORA62.2-201ENST00000364672 152 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 RNU6-1242P-201ENST00000391052 103 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 SNORA17A-201ENST00000391185 133 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 AC010385.1-201ENST00000412374 256 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 AC234781.2-201ENST00000426370 994 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 AC005345.1-201ENST00000431868 217 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 ARL4AP3-201ENST00000441452 574 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 AC118469.1-201ENST00000442943 488 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 RPS7P3-201ENST00000443360 580 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 AC016772.1-201ENST00000444170 1261 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 CASP3P1-201ENST00000446037 609 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 NXT1P1-201ENST00000458481 316 ntBASIC5.56□□□□□ -1.52
SIMC1Q8NDZ2 AC104164.1-201ENST00000460282 590 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms