Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AC083982.1-201ENST00000485679 344 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AP006245.2-201ENST00000522004 300 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AL049839.1-201ENST00000556151 657 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AL121839.1-201ENST00000556233 1185 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AC010424.2-201ENST00000607594 443 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 CR381572.2-201ENST00000624852 397 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 AC073869.10-201ENST00000642016 354 ntBASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
C9orf40Q8IXQ3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC100778.3-201ENST00000580060 1750 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 RNA5SP191-201ENST00000362585 102 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AL139039.2-201ENST00000407436 479 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 GTF3AP5-201ENST00000442645 697 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC010733.1-201ENST00000451515 401 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC234781.3-201ENST00000452540 973 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 RNA5SP103-201ENST00000459503 118 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC092324.1-201ENST00000468671 324 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC105233.1-201ENST00000498840 781 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 SUMO2P4-201ENST00000504193 276 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC005868.1-201ENST00000536421 331 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AL122125.1-201ENST00000616999 600 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AC091953.3-201ENST00000623220 236 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 AP001784.1-201ENST00000624107 428 ntBASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
C9orf40Q8IXQ3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 RBPJP2-201ENST00000618187 1444 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 RNU6-670P-201ENST00000364312 104 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 UBBP2-201ENST00000376781 231 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 U3.30-201ENST00000391308 210 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 GAPDHP15-201ENST00000398586 975 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 SNORA11B-201ENST00000408175 129 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC004074.1-201ENST00000421810 1063 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC007064.3-201ENST00000422608 359 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC012519.1-201ENST00000424588 610 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 MTCO1P51-201ENST00000427672 1060 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AL360081.1-201ENST00000428299 555 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC092162.1-201ENST00000432828 434 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC008072.1-201ENST00000434254 824 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms