Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 Y_RNA.28-201ENST00000362554 111 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 RNA5SP85-201ENST00000365378 119 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 Y_RNA.381-201ENST00000365666 102 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 TRAV35-201ENST00000390462 330 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 RPL32P23-201ENST00000397237 405 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AC007562.1-201ENST00000421819 517 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 DYNLL1P7-201ENST00000429273 258 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 HIGD1AP8-201ENST00000453927 274 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 RN7SL160P-201ENST00000468558 284 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 UGT2A3P7-201ENST00000510485 734 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 RNA5SP318-201ENST00000516352 92 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AP000889.2-201ENST00000532684 490 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AC023050.3-201ENST00000541142 333 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AC008147.3-201ENST00000548666 354 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AC068714.1-201ENST00000559623 800 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 ACTG1P15-201ENST00000570019 1063 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 MIR4271-201ENST00000582451 67 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AC114546.4-201ENST00000624413 369 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AC090771.1-201ENST00000585803 1618 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 TET1P1-201ENST00000426627 2301 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 NSRP1P1-201ENST00000444067 1693 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AP002364.1-201ENST00000623330 3386 ntBASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.25
NPAS3Q8IXF0 AC090337.1-201ENST00000579651 2074 ntBASIC7.21□□□□□ -1.25
NPAS3Q8IXF0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
NPAS3Q8IXF0 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
NPAS3Q8IXF0 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
NPAS3Q8IXF0 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NPAS3Q8IXF0 AL359854.1-201ENST00000614203 1594 ntBASIC7.21□□□□□ -1.25
NPAS3Q8IXF0 FLJ42393-201ENST00000623801 2270 ntBASIC7.21□□□□□ -1.25
NPAS3Q8IXF0 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
NPAS3Q8IXF0 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 OR5J1P-201ENST00000313544 939 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 RNY4P34-201ENST00000364779 95 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 SNORD3H-201ENST00000384486 214 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 RNU2-64P-201ENST00000411315 191 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 MTND3P8-201ENST00000412909 339 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 RPL7P10-201ENST00000417407 739 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 UBE2FP3-201ENST00000436366 524 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 PRDX1P1-201ENST00000449329 596 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC079448.1-201ENST00000449377 373 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 RN7SL379P-201ENST00000479912 293 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 RNA5SP278-201ENST00000517055 102 ntBASIC7.21□□□□□ -1.26
NPAS3Q8IXF0 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms