Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ZNF733P-202ENST00000444809 1573 ntBASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC50Q8IVM0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 RPL23P2-201ENST00000320371 421 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 MIR223-201ENST00000385204 110 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 HDGFP1-201ENST00000405943 252 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 RN7SKP206-201ENST00000410823 293 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AL160275.2-201ENST00000412010 394 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AF186996.5-201ENST00000418098 904 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 EIF4HP2-201ENST00000424380 563 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 TRGV7-201ENST00000427089 353 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AL121578.1-201ENST00000428051 892 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AL163193.1-201ENST00000444895 788 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 RHEBP2-201ENST00000450289 600 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 RN7SL817P-201ENST00000480777 288 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 Y_RNA.719-201ENST00000517156 106 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC026688.1-201ENST00000520639 1168 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 DYNLL1P4-201ENST00000549314 266 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC087477.6-201ENST00000559595 843 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 TVP23CP2-201ENST00000571473 623 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AP005119.2-201ENST00000579735 1105 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 VN1R81P-201ENST00000602085 372 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 IMMP1LP1-201ENST00000605170 488 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC096586.2-201ENST00000610260 441 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC073575.2-201ENST00000614212 627 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 MIR6729-201ENST00000618194 65 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 AC243960.7-201ENST00000623532 707 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 MIR4302-201ENST00000638058 60 ntBASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC50Q8IVM0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AL021331.1-201ENST00000402817 582 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 U3.36-201ENST00000408418 213 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 TBCAP2-201ENST00000416175 326 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 KPNA2P2-201ENST00000419546 1489 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AC004448.2-201ENST00000422360 586 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 Z80107.2-201ENST00000445127 392 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 PABPC1P6-201ENST00000445594 1829 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 RN7SL319P-201ENST00000480656 221 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AC079841.1-201ENST00000481228 950 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AC016687.1-201ENST00000482574 353 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AC116562.1-201ENST00000485355 781 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 RN7SL30P-201ENST00000488416 306 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 SNRPCP2-201ENST00000504370 475 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 SNORA74C-1-201ENST00000580726 201 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 MIR4310-201ENST00000582950 57 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AC140113.4-201ENST00000622087 222 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 AL592182.3-201ENST00000642132 3304 ntBASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC50Q8IVM0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms