Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC074141.1-201ENST00000588129 2995 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 RNA5SP321-201ENST00000362722 111 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 RNA5SP382-201ENST00000363355 112 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 SNORA38B-201ENST00000363524 131 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 RNU6-31P-201ENST00000384388 108 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 SNORA75.4-201ENST00000391278 119 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 RPL12P9-201ENST00000412942 488 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 RPL17P12-201ENST00000413391 526 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC018644.1-201ENST00000429934 551 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AL451074.3-201ENST00000437709 472 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 RPL39P6-201ENST00000448289 150 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 RAB28P3-201ENST00000448325 597 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 MTCO3P11-201ENST00000455103 774 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC105914.1-201ENST00000511798 226 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC013701.1-201ENST00000522657 465 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC091133.5-201ENST00000603088 301 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AL161729.4-201ENST00000604650 476 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AL035413.2-201ENST00000604801 525 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC005084.1-201ENST00000605160 304 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AL133255.1-201ENST00000606374 441 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC005962.2-201ENST00000611427 652 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 MIR6889-201ENST00000613185 59 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AL713922.2-201ENST00000619384 716 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 AC092162.3-201ENST00000624511 1624 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6.02□□□□□ -1.45
ATG4DQ86TL0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATG4DQ86TL0 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 AC062022.1-201ENST00000451026 1684 ntBASIC6.01□□□□□ -1.45
ATG4DQ86TL0 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 FANCD2P2-201ENST00000437591 1400 ntBASIC6.01□□□□□ -1.45
ATG4DQ86TL0 AC114786.1-201ENST00000512892 1415 ntBASIC6.01□□□□□ -1.45
ATG4DQ86TL0 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 Y_RNA.311-201ENST00000365068 96 ntBASIC6.01□□□□□ -1.45
ATG4DQ86TL0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 SNORA7A-201ENST00000384765 139 ntBASIC6.01□□□□□ -1.45
ATG4DQ86TL0 AL034417.1-201ENST00000399343 800 ntBASIC6.01□□□□□ -1.45
ATG4DQ86TL0 RPS27AP11-201ENST00000402798 447 ntBASIC6.01□□□□□ -1.45
ATG4DQ86TL0 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 AC066692.1-201ENST00000421721 457 ntBASIC6.01□□□□□ -1.45
ATG4DQ86TL0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.01□□□□□ -1.45
ATG4DQ86TL0 Z68868.1-201ENST00000429048 544 ntBASIC6.01□□□□□ -1.45
ATG4DQ86TL0 MTND3P2-201ENST00000438452 342 ntBASIC6.01□□□□□ -1.45
ATG4DQ86TL0 AC064862.5-201ENST00000440618 334 ntBASIC6.01□□□□□ -1.45
ATG4DQ86TL0 HMGB3P9-201ENST00000441799 583 ntBASIC6.01□□□□□ -1.45
ATG4DQ86TL0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms