Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU6-1193P-201ENST00000459461 107 ntBASIC5.43□□□□□ -1.54
VCPP55072 AC091180.1-201ENST00000462104 372 ntBASIC5.43□□□□□ -1.54
VCPP55072 AC063943.1-201ENST00000465434 453 ntBASIC5.43□□□□□ -1.54
VCPP55072 AC097484.1-201ENST00000471148 389 ntBASIC5.43□□□□□ -1.54
VCPP55072 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VCPP55072 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.43□□□□□ -1.54
VCPP55072 RPS27AP18-201ENST00000515536 459 ntBASIC5.43□□□□□ -1.54
VCPP55072 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.43□□□□□ -1.54
VCPP55072 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.43□□□□□ -1.54
VCPP55072 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.43□□□□□ -1.54
VCPP55072 AC006349.1-201ENST00000555526 235 ntBASIC5.43□□□□□ -1.54
VCPP55072 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.43□□□□□ -1.54
VCPP55072 BNIP3P5-201ENST00000562290 498 ntBASIC5.43□□□□□ -1.54
VCPP55072 AP005901.4-201ENST00000577336 569 ntBASIC5.43□□□□□ -1.54
VCPP55072 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.43□□□□□ -1.54
VCPP55072 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VCPP55072 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.43□□□□□ -1.54
VCPP55072 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.43□□□□□ -1.54
VCPP55072 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.43□□□□□ -1.54
VCPP55072 AC008814.1-201ENST00000603797 406 ntBASIC5.43□□□□□ -1.54
VCPP55072 AC006338.2-201ENST00000616864 791 ntBASIC5.43□□□□□ -1.54
VCPP55072 RNU6-368P-201ENST00000620928 107 ntBASIC5.43□□□□□ -1.54
VCPP55072 RNU6-538P-201ENST00000622329 107 ntBASIC5.43□□□□□ -1.54
VCPP55072 AC068724.3-201ENST00000625906 87 ntBASIC5.43□□□□□ -1.54
VCPP55072 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.43□□□□□ -1.54
VCPP55072 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.43□□□□□ -1.54
VCPP55072 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VCPP55072 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VCPP55072 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VCPP55072 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.43□□□□□ -1.54
VCPP55072 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VCPP55072 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
VCPP55072 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VCPP55072 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.42□□□□□ -1.54
VCPP55072 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
VCPP55072 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VCPP55072 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VCPP55072 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.42□□□□□ -1.54
VCPP55072 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VCPP55072 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VCPP55072 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VCPP55072 U3.3-201ENST00000362986 216 ntBASIC5.42□□□□□ -1.54
VCPP55072 RN7SKP227-201ENST00000364445 330 ntBASIC5.42□□□□□ -1.54
VCPP55072 RNA5SP223-201ENST00000365174 120 ntBASIC5.42□□□□□ -1.54
VCPP55072 MIR600-201ENST00000385007 98 ntBASIC5.42□□□□□ -1.54
VCPP55072 AC233289.1-201ENST00000403700 508 ntBASIC5.42□□□□□ -1.54
VCPP55072 VN1R31P-201ENST00000417498 730 ntBASIC5.42□□□□□ -1.54
VCPP55072 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.42□□□□□ -1.54
VCPP55072 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.42□□□□□ -1.54
VCPP55072 NFYAP1-201ENST00000431953 972 ntBASIC5.42□□□□□ -1.54
VCPP55072 AL591623.2-201ENST00000449978 222 ntBASIC5.42□□□□□ -1.54
VCPP55072 NUTF2P7-201ENST00000453086 375 ntBASIC5.42□□□□□ -1.54
VCPP55072 snoU13.1-201ENST00000459157 104 ntBASIC5.42□□□□□ -1.54
VCPP55072 RPS4XP12-201ENST00000461747 709 ntBASIC5.42□□□□□ -1.54
VCPP55072 RN7SL189P-201ENST00000468631 289 ntBASIC5.42□□□□□ -1.54
VCPP55072 GTF2F2P1-201ENST00000511083 675 ntBASIC5.42□□□□□ -1.54
VCPP55072 AC006427.1-201ENST00000514359 712 ntBASIC5.42□□□□□ -1.54
VCPP55072 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.42□□□□□ -1.54
VCPP55072 DUX4L52-201ENST00000549363 777 ntBASIC5.42□□□□□ -1.54
VCPP55072 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.42□□□□□ -1.54
VCPP55072 AL121839.1-201ENST00000556233 1185 ntBASIC5.42□□□□□ -1.54
VCPP55072 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VCPP55072 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.42□□□□□ -1.54
VCPP55072 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.42□□□□□ -1.54
VCPP55072 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.42□□□□□ -1.54
VCPP55072 AC135068.12-201ENST00000637370 931 ntBASIC5.42□□□□□ -1.54
VCPP55072 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
VCPP55072 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.42□□□□□ -1.54
VCPP55072 OR52H1-202ENST00000641796 1061 ntBASIC5.42□□□□□ -1.54
VCPP55072 TCP1P3-201ENST00000414406 1498 ntBASIC5.42□□□□□ -1.54
VCPP55072 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VCPP55072 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.42□□□□□ -1.54
VCPP55072 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.42□□□□□ -1.54
VCPP55072 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VCPP55072 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.42□□□□□ -1.54
VCPP55072 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VCPP55072 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.42□□□□□ -1.54
VCPP55072 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VCPP55072 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.41□□□□□ -1.54
VCPP55072 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.41□□□□□ -1.54
VCPP55072 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.41□□□□□ -1.54
VCPP55072 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VCPP55072 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VCPP55072 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VCPP55072 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.41□□□□□ -1.54
VCPP55072 MIR23B-201ENST00000384832 97 ntBASIC5.41□□□□□ -1.54
VCPP55072 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.41□□□□□ -1.54
VCPP55072 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VCPP55072 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.41□□□□□ -1.54
VCPP55072 AC004975.1-201ENST00000428733 208 ntBASIC5.41□□□□□ -1.54
VCPP55072 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.41□□□□□ -1.54
VCPP55072 KCTD10P1-201ENST00000434203 625 ntBASIC5.41□□□□□ -1.54
VCPP55072 AC122718.1-201ENST00000439448 744 ntBASIC5.41□□□□□ -1.54
VCPP55072 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.41□□□□□ -1.54
VCPP55072 AL591363.1-201ENST00000450091 483 ntBASIC5.41□□□□□ -1.54
VCPP55072 OR52Y1P-201ENST00000452418 828 ntBASIC5.41□□□□□ -1.54
VCPP55072 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.41□□□□□ -1.54
VCPP55072 FAM133DP-201ENST00000464802 691 ntBASIC5.41□□□□□ -1.54
VCPP55072 AC069304.1-201ENST00000491593 704 ntBASIC5.41□□□□□ -1.54
VCPP55072 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms