Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RNF144AP50876 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 AL117187.1-201ENST00000555482 181 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AC013283.1-201ENST00000557282 492 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AC026464.5-201ENST00000562497 722 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AC099489.2-201ENST00000574976 260 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 AL669831.4-202ENST00000590817 238 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF144AP50876 AC243773.3-201ENST00000613270 256 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 RN7SL680P-201ENST00000620379 299 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.85□□□□□ -1.31
RNF144AP50876 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC6.85□□□□□ -1.31
RNF144AP50876 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF144AP50876 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.85□□□□□ -1.31
RNF144AP50876 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
RNF144AP50876 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF144AP50876 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF144AP50876 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF144AP50876 AC093909.5-201ENST00000621839 1799 ntBASIC6.85□□□□□ -1.31
RNF144AP50876 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
RNF144AP50876 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 AC092821.2-201ENST00000545710 2042 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF144AP50876 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 AC006600.2-201ENST00000624834 2506 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF144AP50876 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
RNF144AP50876 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RNF144AP50876 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF144AP50876 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
RNF144AP50876 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RNF144AP50876 AC073343.1-201ENST00000328239 651 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 Y_RNA.209-201ENST00000364156 111 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 COQ3-202ENST00000369240 646 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF144AP50876 SNORA68-201ENST00000384437 133 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 MT-TG-201ENST00000387429 68 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 RPL23AP32-201ENST00000395315 459 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 PSMA6P1-201ENST00000400275 741 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 AL121972.1-201ENST00000402023 252 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 RN7SKP266-201ENST00000410232 287 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF144AP50876 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF144AP50876 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RNF144AP50876 AC108039.2-201ENST00000440214 359 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 AC093166.3-201ENST00000448785 303 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 MEMO1P4-201ENST00000453590 386 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF144AP50876 AC091685.2-201ENST00000454924 864 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 MED28P7-201ENST00000456611 530 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF144AP50876 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF144AP50876 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF144AP50876 AC008496.1-201ENST00000509131 295 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.84□□□□□ -1.31
RNF144AP50876 AP003122.3-201ENST00000526316 255 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.84□□□□□ -1.31
RNF144AP50876 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.84□□□□□ -1.31
RNF144AP50876 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 PPIAP14-201ENST00000577627 496 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF144AP50876 AL512605.2-201ENST00000592972 256 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 AC108451.2-201ENST00000603875 538 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF144AP50876 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RNF144AP50876 AC026634.1-201ENST00000634369 198 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
RNF144AP50876 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF144AP50876 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RNF144AP50876 AL049634.1-201ENST00000453770 1720 ntBASIC6.84□□□□□ -1.31
RNF144AP50876 AP003471.1-202ENST00000319051 1988 ntBASIC6.84□□□□□ -1.32
RNF144AP50876 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.84□□□□□ -1.32
RNF144AP50876 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
RNF144AP50876 MAPK10-270ENST00000641102 3538 ntBASIC6.84□□□□□ -1.32
RNF144AP50876 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF144AP50876 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
RNF144AP50876 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF144AP50876 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF144AP50876 UGT2B27P-201ENST00000505092 1620 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 AC107980.1-201ENST00000558671 3355 ntBASIC6.83□□□□□ -1.32
RNF144AP50876 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms