Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SCARNA22-201ENST00000503991 125 ntBASIC5.19□□□□□ -1.58
CASP4P49662 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.19□□□□□ -1.58
CASP4P49662 BRD9P1-201ENST00000529855 560 ntBASIC5.19□□□□□ -1.58
CASP4P49662 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.19□□□□□ -1.58
CASP4P49662 BGLT3-201ENST00000564523 994 ntBASIC5.19□□□□□ -1.58
CASP4P49662 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.19□□□□□ -1.58
CASP4P49662 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CASP4P49662 RN7SL435P-201ENST00000584418 282 ntBASIC5.19□□□□□ -1.58
CASP4P49662 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.19□□□□□ -1.58
CASP4P49662 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.19□□□□□ -1.58
CASP4P49662 FAM25E-202ENST00000608562 189 ntBASIC5.19□□□□□ -1.58
CASP4P49662 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CASP4P49662 AL445487.1-201ENST00000415694 1580 ntBASIC5.19□□□□□ -1.58
CASP4P49662 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CASP4P49662 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CASP4P49662 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.19□□□□□ -1.58
CASP4P49662 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CASP4P49662 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.18□□□□□ -1.58
CASP4P49662 AL442639.1-201ENST00000625030 1899 ntBASIC5.18□□□□□ -1.58
CASP4P49662 AC083843.2-201ENST00000568248 6253 ntBASIC5.18□□□□□ -1.58
CASP4P49662 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CASP4P49662 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CASP4P49662 MIR550A3-201ENST00000390735 95 ntBASIC5.18□□□□□ -1.58
CASP4P49662 AL590762.2-201ENST00000395798 571 ntBASIC5.18□□□□□ -1.58
CASP4P49662 RNA5SP113-201ENST00000410486 84 ntBASIC5.18□□□□□ -1.58
CASP4P49662 AC234781.4-201ENST00000419384 244 ntBASIC5.18□□□□□ -1.58
CASP4P49662 AL034379.1-201ENST00000423216 253 ntBASIC5.18□□□□□ -1.58
CASP4P49662 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.18□□□□□ -1.58
CASP4P49662 CYCSP11-201ENST00000436426 315 ntBASIC5.18□□□□□ -1.58
CASP4P49662 RBMY2TP-201ENST00000451162 947 ntBASIC5.18□□□□□ -1.58
CASP4P49662 AC079168.2-201ENST00000453977 416 ntBASIC5.18□□□□□ -1.58
CASP4P49662 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CASP4P49662 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.18□□□□□ -1.58
CASP4P49662 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.18□□□□□ -1.58
CASP4P49662 AC105233.1-201ENST00000498840 781 ntBASIC5.18□□□□□ -1.58
CASP4P49662 AC073358.1-201ENST00000505671 684 ntBASIC5.18□□□□□ -1.58
CASP4P49662 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.18□□□□□ -1.58
CASP4P49662 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.18□□□□□ -1.58
CASP4P49662 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.18□□□□□ -1.58
CASP4P49662 RFPL4AP3-201ENST00000515267 345 ntBASIC5.18□□□□□ -1.58
CASP4P49662 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.18□□□□□ -1.58
CASP4P49662 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CASP4P49662 AL390334.1-201ENST00000556395 450 ntBASIC5.18□□□□□ -1.58
CASP4P49662 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.18□□□□□ -1.58
CASP4P49662 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.18□□□□□ -1.58
CASP4P49662 VN1R81P-201ENST00000602085 372 ntBASIC5.18□□□□□ -1.58
CASP4P49662 QTRT1P1-201ENST00000604344 1078 ntBASIC5.18□□□□□ -1.58
CASP4P49662 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.18□□□□□ -1.58
CASP4P49662 MIR8069-1-201ENST00000616627 86 ntBASIC5.18□□□□□ -1.58
CASP4P49662 MIR8069-2-201ENST00000621412 86 ntBASIC5.18□□□□□ -1.58
CASP4P49662 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CASP4P49662 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CASP4P49662 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.18□□□□□ -1.58
CASP4P49662 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CASP4P49662 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.18□□□□□ -1.58
CASP4P49662 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CASP4P49662 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.17□□□□□ -1.58
CASP4P49662 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CASP4P49662 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.17□□□□□ -1.58
CASP4P49662 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.17□□□□□ -1.58
CASP4P49662 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CASP4P49662 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.17□□□□□ -1.58
CASP4P49662 DHX9P1-201ENST00000436565 3076 ntBASIC5.17□□□□□ -1.58
CASP4P49662 RNU1-83P-201ENST00000363426 164 ntBASIC5.17□□□□□ -1.58
CASP4P49662 NPM1P40-201ENST00000412758 733 ntBASIC5.17□□□□□ -1.58
CASP4P49662 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.17□□□□□ -1.58
CASP4P49662 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.17□□□□□ -1.58
CASP4P49662 SETP10-201ENST00000424368 814 ntBASIC5.17□□□□□ -1.58
CASP4P49662 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.17□□□□□ -1.58
CASP4P49662 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.17□□□□□ -1.58
CASP4P49662 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.17□□□□□ -1.58
CASP4P49662 AC091685.2-201ENST00000454924 864 ntBASIC5.17□□□□□ -1.58
CASP4P49662 RPS5P7-201ENST00000456664 608 ntBASIC5.17□□□□□ -1.58
CASP4P49662 RN7SL610P-201ENST00000463845 291 ntBASIC5.17□□□□□ -1.58
CASP4P49662 AC016687.1-201ENST00000482574 353 ntBASIC5.17□□□□□ -1.58
CASP4P49662 AC069304.1-201ENST00000491593 704 ntBASIC5.17□□□□□ -1.58
CASP4P49662 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.17□□□□□ -1.58
CASP4P49662 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.17□□□□□ -1.58
CASP4P49662 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.17□□□□□ -1.58
CASP4P49662 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.17□□□□□ -1.58
CASP4P49662 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.17□□□□□ -1.58
CASP4P49662 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.17□□□□□ -1.58
CASP4P49662 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.17□□□□□ -1.58
CASP4P49662 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.17□□□□□ -1.58
CASP4P49662 MIR3667-201ENST00000581025 74 ntBASIC5.17□□□□□ -1.58
CASP4P49662 IMMP1LP1-201ENST00000605170 488 ntBASIC5.17□□□□□ -1.58
CASP4P49662 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.17□□□□□ -1.58
CASP4P49662 AC091953.3-201ENST00000623220 236 ntBASIC5.17□□□□□ -1.58
CASP4P49662 AC015871.5-202ENST00000623252 701 ntBASIC5.17□□□□□ -1.58
CASP4P49662 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
CASP4P49662 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CASP4P49662 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.17□□□□□ -1.58
CASP4P49662 AL121950.1-201ENST00000624993 2077 ntBASIC5.17□□□□□ -1.58
CASP4P49662 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.17□□□□□ -1.58
CASP4P49662 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CASP4P49662 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CASP4P49662 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CASP4P49662 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CASP4P49662 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CASP4P49662 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms