Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL356131.1-201ENST00000405826 414 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AL590084.1-201ENST00000407885 387 ntBASIC4.93□□□□□ -1.62
SOX2P48431 RN7SKP146-201ENST00000410242 334 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AC002524.1-201ENST00000411687 547 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.93□□□□□ -1.62
SOX2P48431 OR4K6P-201ENST00000416478 897 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AC009518.2-201ENST00000418056 731 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.93□□□□□ -1.62
SOX2P48431 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX2P48431 UBE2V1P1-201ENST00000430836 445 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX2P48431 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX2P48431 NDUFB4P8-201ENST00000435351 367 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX2P48431 PCBP2P1-201ENST00000437262 977 ntBASIC4.93□□□□□ -1.62
SOX2P48431 TUBB4BP6-201ENST00000437576 479 ntBASIC4.93□□□□□ -1.62
SOX2P48431 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX2P48431 ART2BP-201ENST00000453501 499 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.93□□□□□ -1.62
SOX2P48431 AC010468.1-201ENST00000461022 817 ntBASIC4.93□□□□□ -1.62
SOX2P48431 RPS3AP22-201ENST00000488297 769 ntBASIC4.93□□□□□ -1.62
SOX2P48431 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX2P48431 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX2P48431 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX2P48431 AC112484.3-201ENST00000505910 329 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AC113347.3-201ENST00000509113 148 ntBASIC4.93□□□□□ -1.62
SOX2P48431 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.93□□□□□ -1.62
SOX2P48431 AC138938.1-201ENST00000515431 782 ntBASIC4.93□□□□□ -1.62
SOX2P48431 RN7SKP35-201ENST00000517210 151 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.93□□□□□ -1.62
SOX2P48431 WBP1LP3-201ENST00000523033 208 ntBASIC4.93□□□□□ -1.62
SOX2P48431 MTCO1P47-201ENST00000523889 1271 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.93□□□□□ -1.62
SOX2P48431 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.93□□□□□ -1.62
SOX2P48431 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.93□□□□□ -1.62
SOX2P48431 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
SOX2P48431 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX2P48431 AC008083.2-201ENST00000546707 476 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AL442163.2-201ENST00000553912 710 ntBASIC4.93□□□□□ -1.62
SOX2P48431 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX2P48431 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX2P48431 AL354943.1-201ENST00000572103 781 ntBASIC4.93□□□□□ -1.62
SOX2P48431 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SOX2P48431 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SOX2P48431 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.93□□□□□ -1.62
SOX2P48431 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX2P48431 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.93□□□□□ -1.62
SOX2P48431 DPRXP5-201ENST00000604662 539 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AL133507.1-201ENST00000605269 557 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AL022394.1-201ENST00000606979 292 ntBASIC4.93□□□□□ -1.62
SOX2P48431 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX2P48431 MIR6809-201ENST00000612189 116 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AL139407.1-201ENST00000613826 1175 ntBASIC4.93□□□□□ -1.62
SOX2P48431 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX2P48431 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX2P48431 AC145207.9-201ENST00000623802 325 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AC004943.3-201ENST00000624116 600 ntBASIC4.93□□□□□ -1.62
SOX2P48431 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX2P48431 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX2P48431 MIR1322-201ENST00000638013 71 ntBASIC4.93□□□□□ -1.62
SOX2P48431 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SOX2P48431 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX2P48431 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
SOX2P48431 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX2P48431 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SOX2P48431 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
SOX2P48431 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX2P48431 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX2P48431 AC104446.1-201ENST00000613728 1321 ntBASIC4.93□□□□□ -1.62
SOX2P48431 PWAR1-201ENST00000624188 2414 ntBASIC4.93□□□□□ -1.62
SOX2P48431 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX2P48431 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX2P48431 QRSL1P1-201ENST00000400977 1540 ntBASIC4.92□□□□□ -1.62
SOX2P48431 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX2P48431 AC005261.4-201ENST00000600047 1385 ntBASIC4.92□□□□□ -1.62
SOX2P48431 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 MUC2-202ENST00000613187 4845 ntBASIC4.92□□□□□ -1.62
SOX2P48431 AC004158.1-201ENST00000564508 4319 ntBASIC4.92□□□□□ -1.62
SOX2P48431 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SOX2P48431 RNA5SP187-201ENST00000384400 119 ntBASIC4.92□□□□□ -1.62
SOX2P48431 MIR525-201ENST00000384978 85 ntBASIC4.92□□□□□ -1.62
SOX2P48431 AC104297.1-201ENST00000393779 870 ntBASIC4.92□□□□□ -1.62
SOX2P48431 ERHP2-201ENST00000402323 299 ntBASIC4.92□□□□□ -1.62
SOX2P48431 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX2P48431 RPS6P23-201ENST00000413224 722 ntBASIC4.92□□□□□ -1.62
SOX2P48431 LINC01881-201ENST00000416103 412 ntBASIC4.92□□□□□ -1.62
SOX2P48431 AL139158.1-201ENST00000424719 340 ntBASIC4.92□□□□□ -1.62
SOX2P48431 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX2P48431 MOB1AP1-201ENST00000430903 535 ntBASIC4.92□□□□□ -1.62
SOX2P48431 AC126120.1-201ENST00000431082 470 ntBASIC4.92□□□□□ -1.62
SOX2P48431 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX2P48431 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX2P48431 AC064862.5-201ENST00000440618 334 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms