Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXD12P35452 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXD12P35452 MIR4646-201ENST00000580775 63 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 EIF1P5-201ENST00000585002 234 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXD12P35452 AC011492.1-201ENST00000600023 315 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 AC079880.2-201ENST00000603790 1213 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 AC069431.2-201ENST00000604149 1099 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 AC004890.3-201ENST00000605566 1095 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 AC012557.1-201ENST00000607115 611 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 AC124016.2-201ENST00000610058 665 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 AC126915.2-201ENST00000610957 190 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 AC078880.5-201ENST00000617845 421 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 AL356863.1-201ENST00000623378 1080 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXD12P35452 AL590396.4-201ENST00000636779 956 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 AC130304.1-201ENST00000622942 2385 ntBASIC5.6□□□□□ -1.51
HOXD12P35452 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXD12P35452 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD12P35452 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD12P35452 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXD12P35452 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HOXD12P35452 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
HOXD12P35452 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD12P35452 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD12P35452 AC131971.1-201ENST00000332881 1482 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 AC005332.5-201ENST00000591222 2919 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD12P35452 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD12P35452 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD12P35452 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
HOXD12P35452 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD12P35452 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD12P35452 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXD12P35452 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD12P35452 RNA5SP305-201ENST00000362665 119 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 U3.10-201ENST00000364459 214 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 RNU6-178P-201ENST00000384631 104 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD12P35452 AL390774.1-201ENST00000411924 246 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 SETP15-201ENST00000412724 337 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 RPL35AP24-201ENST00000413846 330 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 TATDN1P1-201ENST00000414123 891 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 AC006994.1-201ENST00000438212 839 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 KRT8P51-201ENST00000438938 274 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 AURKAPS1-201ENST00000451805 1212 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 RPS23P2-201ENST00000463671 415 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 RPL5P22-201ENST00000480199 884 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 RPS4XP1-201ENST00000482189 787 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 RPS3AP6-201ENST00000484430 795 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
HOXD12P35452 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.59□□□□□ -1.51
HOXD12P35452 OR5H3P-201ENST00000502817 919 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 AC069306.1-201ENST00000507006 843 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD12P35452 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXD12P35452 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.59□□□□□ -1.51
HOXD12P35452 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.59□□□□□ -1.51
HOXD12P35452 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXD12P35452 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD12P35452 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD12P35452 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HOXD12P35452 AL121594.2-201ENST00000541658 472 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD12P35452 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXD12P35452 AC126177.5-201ENST00000549599 178 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD12P35452 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD12P35452 AGGF1P9-201ENST00000561884 913 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 MTATP6P24-201ENST00000576835 677 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 AC022884.3-201ENST00000579571 248 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD12P35452 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD12P35452 AC087763.1-201ENST00000603391 286 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD12P35452 MIR6748-201ENST00000610433 71 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 Mico1.1-201ENST00000611698 204 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 AC009163.6-201ENST00000612367 342 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 AC140725.3-201ENST00000616193 880 ntBASIC5.59□□□□□ -1.51
HOXD12P35452 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD12P35452 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HOXD12P35452 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
HOXD12P35452 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HOXD12P35452 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD12P35452 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
HOXD12P35452 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HOXD12P35452 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HOXD12P35452 AP000756.2-201ENST00000624168 2567 ntBASIC5.59□□□□□ -1.52
HOXD12P35452 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HOXD12P35452 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
HOXD12P35452 MFSD8-239ENST00000641590 2479 ntBASIC5.58□□□□□ -1.52
HOXD12P35452 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
HOXD12P35452 AC023421.1-201ENST00000590535 1785 ntBASIC5.58□□□□□ -1.52
HOXD12P35452 AC103591.2-201ENST00000265259 766 ntBASIC5.58□□□□□ -1.52
HOXD12P35452 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD12P35452 RN7SKP115-201ENST00000363177 317 ntBASIC5.58□□□□□ -1.52
HOXD12P35452 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HOXD12P35452 MIR551A-201ENST00000385042 96 ntBASIC5.58□□□□□ -1.52
HOXD12P35452 ATP5HP3-201ENST00000396994 486 ntBASIC5.58□□□□□ -1.52
HOXD12P35452 Y_RNA.625-201ENST00000411256 107 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms