Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNA3P32297 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNA3P32297 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CHRNA3P32297 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA3P32297 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.22□□□□□ -1.57
CHRNA3P32297 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
CHRNA3P32297 AC131971.1-201ENST00000332881 1482 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA3P32297 SNORA73.1-201ENST00000363107 205 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 RNU4-7P-201ENST00000364758 141 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CHRNA3P32297 LRRC37BP1-201ENST00000398851 714 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 CHMP1B2P-201ENST00000399581 597 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 RN7SKP125-201ENST00000410481 302 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CHRNA3P32297 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA3P32297 QRSL1P2-201ENST00000418582 964 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 CKS1BP6-201ENST00000424932 240 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.22□□□□□ -1.57
CHRNA3P32297 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNA3P32297 OTX2P1-201ENST00000450956 354 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNA3P32297 AL691482.1-201ENST00000453255 87 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA3P32297 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNA3P32297 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNA3P32297 RPL7AP10-201ENST00000481016 791 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNA3P32297 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.22□□□□□ -1.57
CHRNA3P32297 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNA3P32297 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.22□□□□□ -1.57
CHRNA3P32297 RN7SKP260-201ENST00000516907 149 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNA3P32297 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA3P32297 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNA3P32297 EIF1AXP2-201ENST00000555940 413 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNA3P32297 AC008536.1-201ENST00000602872 669 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 AC093799.2-201ENST00000610062 578 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA3P32297 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA3P32297 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA3P32297 AC104260.2-201ENST00000623551 3497 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA3P32297 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA3P32297 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA3P32297 DHX9P1-201ENST00000436565 3076 ntBASIC5.22□□□□□ -1.57
CHRNA3P32297 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
CHRNA3P32297 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHRNA3P32297 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CHRNA3P32297 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHRNA3P32297 AC019072.1-201ENST00000604535 1551 ntBASIC5.21□□□□□ -1.57
CHRNA3P32297 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHRNA3P32297 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA3P32297 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA3P32297 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA3P32297 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
CHRNA3P32297 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CHRNA3P32297 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA3P32297 RNU6-386P-201ENST00000362650 107 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 AP000580.1-201ENST00000404439 358 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 DDX39BP1-205ENST00000422507 192 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 HMGB1P32-201ENST00000425971 565 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 RBMY2QP-201ENST00000429799 1147 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA3P32297 VN1R54P-201ENST00000435210 1049 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA3P32297 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA3P32297 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA3P32297 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA3P32297 RPS29P9-201ENST00000440360 171 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA3P32297 SBDSP1-204ENST00000453858 737 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 HMGB1P4-201ENST00000455362 567 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 AL133244.1-201ENST00000456007 258 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.21□□□□□ -1.58
CHRNA3P32297 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA3P32297 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA3P32297 NDUFB5P1-201ENST00000508134 564 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 AC110775.1-201ENST00000513721 462 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 AP000676.2-201ENST00000529711 301 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA3P32297 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA3P32297 RNF138P2-201ENST00000603490 592 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 EIF3FP1-201ENST00000613970 806 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 AC087565.3-202ENST00000642085 1603 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA3P32297 AC107068.1-201ENST00000563286 4218 ntBASIC5.21□□□□□ -1.58
CHRNA3P32297 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA3P32297 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA3P32297 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA3P32297 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CHRNA3P32297 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA3P32297 AL121950.1-201ENST00000624993 2077 ntBASIC5.2□□□□□ -1.58
CHRNA3P32297 NXF4-202ENST00000416098 1465 ntBASIC5.2□□□□□ -1.58
CHRNA3P32297 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA3P32297 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA3P32297 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CHRNA3P32297 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CHRNA3P32297 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms