Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
HOXC12P31275 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC12P31275 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC12P31275 FGF7P2-201ENST00000332473 296 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 RNA5SP85-201ENST00000365378 119 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 SUGT1P1-201ENST00000379514 476 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 FDPSP5-201ENST00000399474 1057 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 AL589647.1-201ENST00000402485 466 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC12P31275 RN7SKP271-201ENST00000410528 320 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 RNU4-64P-201ENST00000410795 131 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 RPS7P13-201ENST00000413955 498 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 ATG4AP1-201ENST00000416893 538 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC12P31275 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 AC092647.1-201ENST00000420654 287 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 FNDC3CP-201ENST00000420795 1155 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC12P31275 RPS24P8-201ENST00000431490 402 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC12P31275 CRYGGP-201ENST00000443337 145 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 AC002486.2-201ENST00000447806 590 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC12P31275 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC12P31275 AL603882.1-201ENST00000463059 681 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.93□□□□□ -1.46
HOXC12P31275 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC12P31275 HMGN2P25-201ENST00000486956 268 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 PDCL3P4-201ENST00000489621 720 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 MTCYBP43-201ENST00000513621 740 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 RNU6-1178P-201ENST00000516674 107 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 NRON-201ENST00000517270 370 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC12P31275 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC12P31275 COX6B1P6-201ENST00000522347 255 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC12P31275 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.93□□□□□ -1.46
HOXC12P31275 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC12P31275 AC074029.1-201ENST00000552531 1044 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC12P31275 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 PCMTD1P2-201ENST00000565017 355 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC12P31275 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 AC079315.1-201ENST00000602952 623 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 AC011891.2-201ENST00000604949 397 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC12P31275 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC12P31275 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 AC079228.1-201ENST00000624774 1049 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC12P31275 AC111152.1-202ENST00000635848 339 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC12P31275 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC12P31275 ASNSP1-204ENST00000641977 1664 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 LINC02019-201ENST00000608605 2060 ntBASIC5.93□□□□□ -1.46
HOXC12P31275 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC12P31275 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
HOXC12P31275 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC12P31275 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
HOXC12P31275 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC5.93□□□□□ -1.46
HOXC12P31275 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC12P31275 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC12P31275 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC12P31275 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC12P31275 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC12P31275 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
HOXC12P31275 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC12P31275 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC12P31275 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC12P31275 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC12P31275 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC12P31275 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC12P31275 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC12P31275 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC12P31275 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HOXC12P31275 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC12P31275 RNU6-249P-201ENST00000363016 102 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms