Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SHC1P29353 THAP12P4-201ENST00000528321 2266 ntBASIC4.56□□□□□ -1.68
SHC1P29353 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHC1P29353 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHC1P29353 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
SHC1P29353 AC083843.3-201ENST00000623679 2186 ntBASIC4.55□□□□□ -1.68
SHC1P29353 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHC1P29353 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.55□□□□□ -1.68
SHC1P29353 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SHC1P29353 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.55□□□□□ -1.68
SHC1P29353 AC245100.2-201ENST00000454544 1679 ntBASIC4.55□□□□□ -1.68
SHC1P29353 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHC1P29353 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
SHC1P29353 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.55□□□□□ -1.68
SHC1P29353 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHC1P29353 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SHC1P29353 RN7SKP113-201ENST00000363891 295 ntBASIC4.55□□□□□ -1.68
SHC1P29353 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SHC1P29353 MIR105-2-201ENST00000385083 81 ntBASIC4.55□□□□□ -1.68
SHC1P29353 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.55□□□□□ -1.68
SHC1P29353 AC093162.1-201ENST00000419682 124 ntBASIC4.55□□□□□ -1.68
SHC1P29353 OR6C64P-201ENST00000419708 825 ntBASIC4.55□□□□□ -1.68
SHC1P29353 DDX39BP1-205ENST00000422507 192 ntBASIC4.55□□□□□ -1.68
SHC1P29353 CR848007.2-201ENST00000424918 787 ntBASIC4.55□□□□□ -1.68
SHC1P29353 FAR1P1-201ENST00000427163 934 ntBASIC4.55□□□□□ -1.68
SHC1P29353 AL590623.1-201ENST00000427864 105 ntBASIC4.55□□□□□ -1.68
SHC1P29353 AC092647.3-201ENST00000443044 633 ntBASIC4.55□□□□□ -1.68
SHC1P29353 RPS15AP29-201ENST00000445539 400 ntBASIC4.55□□□□□ -1.68
SHC1P29353 KNOP1P3-201ENST00000446933 426 ntBASIC4.55□□□□□ -1.68
SHC1P29353 AL356390.1-201ENST00000455684 397 ntBASIC4.55□□□□□ -1.68
SHC1P29353 AC147055.3-201ENST00000510547 851 ntBASIC4.55□□□□□ -1.68
SHC1P29353 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.55□□□□□ -1.68
SHC1P29353 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHC1P29353 RNA5SP43-201ENST00000516559 110 ntBASIC4.55□□□□□ -1.68
SHC1P29353 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.55□□□□□ -1.68
SHC1P29353 AC012339.2-201ENST00000523996 453 ntBASIC4.55□□□□□ -1.68
SHC1P29353 SETP1-201ENST00000556014 845 ntBASIC4.55□□□□□ -1.68
SHC1P29353 AL390726.5-202ENST00000564800 256 ntBASIC4.55□□□□□ -1.68
SHC1P29353 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.55□□□□□ -1.68
SHC1P29353 AC090330.1-201ENST00000588646 764 ntBASIC4.55□□□□□ -1.68
SHC1P29353 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.55□□□□□ -1.68
SHC1P29353 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.55□□□□□ -1.68
SHC1P29353 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.55□□□□□ -1.68
SHC1P29353 CASC19-281ENST00000642118 1554 ntBASIC4.55□□□□□ -1.68
SHC1P29353 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHC1P29353 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHC1P29353 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SHC1P29353 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.55□□□□□ -1.68
SHC1P29353 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SHC1P29353 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SHC1P29353 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
SHC1P29353 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHC1P29353 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SHC1P29353 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHC1P29353 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.54□□□□□ -1.68
SHC1P29353 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.54□□□□□ -1.68
SHC1P29353 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHC1P29353 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHC1P29353 RNA5SP428-201ENST00000365129 132 ntBASIC4.54□□□□□ -1.68
SHC1P29353 SNORA70.10-201ENST00000384515 134 ntBASIC4.54□□□□□ -1.68
SHC1P29353 SNORA66-201ENST00000384792 133 ntBASIC4.54□□□□□ -1.68
SHC1P29353 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SHC1P29353 RNU6-564P-201ENST00000410983 104 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.54□□□□□ -1.68
SHC1P29353 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.54□□□□□ -1.68
SHC1P29353 RBMY2QP-201ENST00000429799 1147 ntBASIC4.54□□□□□ -1.68
SHC1P29353 NDUFA5P1-201ENST00000433858 341 ntBASIC4.54□□□□□ -1.68
SHC1P29353 MAPRE1P3-201ENST00000435438 796 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.54□□□□□ -1.68
SHC1P29353 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.54□□□□□ -1.68
SHC1P29353 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.54□□□□□ -1.68
SHC1P29353 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.54□□□□□ -1.68
SHC1P29353 snoU13.20-201ENST00000459180 104 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AC016687.1-201ENST00000482574 353 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AC004453.1-201ENST00000487895 408 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AC073073.1-201ENST00000493920 463 ntBASIC4.54□□□□□ -1.68
SHC1P29353 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
SHC1P29353 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.54□□□□□ -1.68
SHC1P29353 AC106806.2-201ENST00000509365 500 ntBASIC4.54□□□□□ -1.68
SHC1P29353 COX6B1P5-201ENST00000509843 249 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.54□□□□□ -1.68
SHC1P29353 AC138938.1-201ENST00000515431 782 ntBASIC4.54□□□□□ -1.68
SHC1P29353 RN7SKP157-201ENST00000516174 282 ntBASIC4.54□□□□□ -1.68
SHC1P29353 RN7SKP260-201ENST00000516907 149 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.54□□□□□ -1.68
SHC1P29353 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.54□□□□□ -1.68
SHC1P29353 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
SHC1P29353 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.54□□□□□ -1.68
SHC1P29353 OR7E128P-201ENST00000532736 1024 ntBASIC4.54□□□□□ -1.68
SHC1P29353 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.54□□□□□ -1.68
SHC1P29353 CR383656.14-201ENST00000551951 406 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AC051619.2-201ENST00000559063 397 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.54□□□□□ -1.68
SHC1P29353 AC233702.9-201ENST00000581528 203 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.54□□□□□ -1.68
SHC1P29353 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.54□□□□□ -1.68
SHC1P29353 AC098483.2-201ENST00000603158 454 ntBASIC4.54□□□□□ -1.68
SHC1P29353 RPAP2P1-201ENST00000603626 1168 ntBASIC4.54□□□□□ -1.68
SHC1P29353 MEMO1P5-201ENST00000604810 406 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AL021707.7-201ENST00000607991 416 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms