Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC072039.2-201ENST00000608883 439 ntBASIC7.5□□□□□ -1.21
RXRBP28702 AC024941.1-201ENST00000612250 334 ntBASIC7.5□□□□□ -1.21
RXRBP28702 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.5□□□□□ -1.21
RXRBP28702 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC7.5□□□□□ -1.21
RXRBP28702 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.5□□□□□ -1.21
RXRBP28702 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.5□□□□□ -1.21
RXRBP28702 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.5□□□□□ -1.21
RXRBP28702 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 MAPK10-365ENST00000641902 3825 ntBASIC7.5□□□□□ -1.21
RXRBP28702 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RXRBP28702 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.5□□□□□ -1.21
RXRBP28702 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
RXRBP28702 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RXRBP28702 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.49□□□□□ -1.21
RXRBP28702 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.49□□□□□ -1.21
RXRBP28702 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.49□□□□□ -1.21
RXRBP28702 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RXRBP28702 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RXRBP28702 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RXRBP28702 SNORA17.1-201ENST00000362945 126 ntBASIC7.49□□□□□ -1.21
RXRBP28702 RN7SKP227-201ENST00000364445 330 ntBASIC7.49□□□□□ -1.21
RXRBP28702 RNA5SP30-201ENST00000365552 115 ntBASIC7.49□□□□□ -1.21
RXRBP28702 RNU6-83P-201ENST00000384568 112 ntBASIC7.49□□□□□ -1.21
RXRBP28702 RNA5SP91-201ENST00000390902 119 ntBASIC7.49□□□□□ -1.21
RXRBP28702 RNU6ATAC25P-201ENST00000408798 117 ntBASIC7.49□□□□□ -1.21
RXRBP28702 FCF1P9-201ENST00000412546 282 ntBASIC7.49□□□□□ -1.21
RXRBP28702 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC7.49□□□□□ -1.21
RXRBP28702 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC7.49□□□□□ -1.21
RXRBP28702 AC009480.2-201ENST00000422916 432 ntBASIC7.49□□□□□ -1.21
RXRBP28702 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.49□□□□□ -1.21
RXRBP28702 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC7.49□□□□□ -1.21
RXRBP28702 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.49□□□□□ -1.21
RXRBP28702 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.49□□□□□ -1.21
RXRBP28702 RPL6P9-201ENST00000466502 859 ntBASIC7.49□□□□□ -1.21
RXRBP28702 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 RPL7P40-201ENST00000481703 745 ntBASIC7.49□□□□□ -1.21
RXRBP28702 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC7.49□□□□□ -1.21
RXRBP28702 AC138938.1-201ENST00000515431 782 ntBASIC7.49□□□□□ -1.21
RXRBP28702 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.49□□□□□ -1.21
RXRBP28702 RNU6-941P-201ENST00000516346 108 ntBASIC7.49□□□□□ -1.21
RXRBP28702 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC7.49□□□□□ -1.21
RXRBP28702 MAL2-208ENST00000523307 556 ntTSL 4 BASIC7.49□□□□□ -1.21
RXRBP28702 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.49□□□□□ -1.21
RXRBP28702 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC7.49□□□□□ -1.21
RXRBP28702 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.49□□□□□ -1.21
RXRBP28702 EIF1P4-201ENST00000572664 335 ntBASIC7.49□□□□□ -1.21
RXRBP28702 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.49□□□□□ -1.21
RXRBP28702 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 AL096803.3-201ENST00000609032 532 ntBASIC7.49□□□□□ -1.21
RXRBP28702 AC012409.3-201ENST00000611343 981 ntBASIC7.49□□□□□ -1.21
RXRBP28702 EIF3FP1-201ENST00000613970 806 ntBASIC7.49□□□□□ -1.21
RXRBP28702 U6atac.1-201ENST00000616025 117 ntBASIC7.49□□□□□ -1.21
RXRBP28702 AC068137.3-201ENST00000639191 341 ntBASIC7.49□□□□□ -1.21
RXRBP28702 AC073869.6-201ENST00000640656 341 ntBASIC7.49□□□□□ -1.21
RXRBP28702 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.49□□□□□ -1.21
RXRBP28702 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
RXRBP28702 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
RXRBP28702 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RXRBP28702 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RXRBP28702 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RXRBP28702 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.48□□□□□ -1.21
RXRBP28702 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RXRBP28702 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RXRBP28702 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.48□□□□□ -1.21
RXRBP28702 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
RXRBP28702 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.48□□□□□ -1.21
RXRBP28702 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
RXRBP28702 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.48□□□□□ -1.21
RXRBP28702 AL353625.1-202ENST00000366273 571 ntBASIC7.48□□□□□ -1.21
RXRBP28702 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
RXRBP28702 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RXRBP28702 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.48□□□□□ -1.21
RXRBP28702 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RXRBP28702 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.48□□□□□ -1.21
RXRBP28702 RNF19BPX-201ENST00000426224 625 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.48□□□□□ -1.21
RXRBP28702 AC129850.1-201ENST00000436203 508 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC7.48□□□□□ -1.21
RXRBP28702 PTENP1-201ENST00000447117 1215 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AC105399.1-202ENST00000447303 205 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.48□□□□□ -1.21
RXRBP28702 RPS6P2-201ENST00000454208 705 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AC005410.1-202ENST00000460347 485 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AC015864.1-201ENST00000496512 544 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms