Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 CYP4F35P-202ENST00000636121 390 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC092079.1-201ENST00000558620 1985 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC235565.1-201ENST00000456962 1325 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC105074.1-201ENST00000623380 3095 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AL133243.3-201ENST00000617415 3004 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC011155.1-201ENST00000316512 456 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 RNU6-984P-201ENST00000363236 109 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 SNORA70.10-201ENST00000384515 134 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC010740.1-201ENST00000417035 684 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 RPS4XP16-201ENST00000427198 791 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMAP28067 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC022022.1-201ENST00000430304 178 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 FAM96AP1-201ENST00000430879 482 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC133473.1-201ENST00000455173 299 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 RPL23AP2-201ENST00000471227 466 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC007998.1-201ENST00000474156 672 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 GTF2F2P1-201ENST00000511083 675 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC090281.1-201ENST00000523019 276 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 OR8X1P-201ENST00000534542 869 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMAP28067 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC008759.1-201ENST00000589783 983 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC130352.1-201ENST00000602979 661 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 RPSAP73-201ENST00000614820 330 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 RMST_9.1-201ENST00000619945 193 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 MIR4727-201ENST00000622232 55 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMAP28067 AC012020.1-201ENST00000624541 1728 ntBASIC4.2□□□□□ -1.74
HLA-DMAP28067 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMAP28067 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMAP28067 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMAP28067 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DMAP28067 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMAP28067 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DMAP28067 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 SNORD74.4-201ENST00000364129 80 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 RN7SKP275-201ENST00000364626 301 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 MIR600-201ENST00000385007 98 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 RNU1-77P-201ENST00000390868 162 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 MIR1182-201ENST00000408363 97 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 AL133325.1-201ENST00000421090 382 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 BX323845.1-201ENST00000432417 179 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 MAPRE1P3-201ENST00000435438 796 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 RPL12P46-201ENST00000436610 195 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 AL161636.2-201ENST00000445179 927 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 CLIC4P1-201ENST00000453177 535 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DMAP28067 NDUFB4P12-201ENST00000513465 390 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 IGLV3-26-201ENST00000520756 302 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 IGKV2-4-201ENST00000523070 340 ntBASIC4.19□□□□□ -1.74
HLA-DMAP28067 AC012339.2-201ENST00000523996 453 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms