Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC016559.2-201ENST00000510759 359 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AC012400.1-201ENST00000518452 381 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH3P22223 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH3P22223 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH3P22223 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH3P22223 OR11J2P-201ENST00000555298 907 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AC092868.3-201ENST00000560515 784 ntBASIC5.08□□□□□ -1.6
CDH3P22223 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH3P22223 PRPF19P1-201ENST00000584766 898 ntBASIC5.08□□□□□ -1.6
CDH3P22223 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH3P22223 ADAD1P2-201ENST00000588476 646 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH3P22223 AC040174.2-201ENST00000602701 465 ntBASIC5.08□□□□□ -1.6
CDH3P22223 TAS2R6P-201ENST00000605022 826 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AC012213.4-201ENST00000606457 354 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AC092574.1-201ENST00000609771 420 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AC015922.4-201ENST00000612568 690 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH3P22223 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH3P22223 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH3P22223 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.08□□□□□ -1.6
CDH3P22223 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CDH3P22223 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH3P22223 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH3P22223 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH3P22223 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDH3P22223 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH3P22223 LINC01355-201ENST00000566551 5444 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AC079298.1-201ENST00000625026 1619 ntBASIC5.08□□□□□ -1.6
CDH3P22223 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH3P22223 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDH3P22223 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 AC126323.6-202ENST00000568092 3511 ntBASIC5.07□□□□□ -1.6
CDH3P22223 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH3P22223 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDH3P22223 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
CDH3P22223 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH3P22223 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH3P22223 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDH3P22223 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 CCNB2P1-201ENST00000399411 1150 ntBASIC5.07□□□□□ -1.6
CDH3P22223 RPL10P10-201ENST00000403509 664 ntBASIC5.07□□□□□ -1.6
CDH3P22223 UBE2V1P15-201ENST00000407776 448 ntBASIC5.07□□□□□ -1.6
CDH3P22223 RNU2-72P-201ENST00000411175 163 ntBASIC5.07□□□□□ -1.6
CDH3P22223 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH3P22223 RPL23AP27-201ENST00000415161 451 ntBASIC5.07□□□□□ -1.6
CDH3P22223 AL357078.2-201ENST00000416486 427 ntBASIC5.07□□□□□ -1.6
CDH3P22223 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH3P22223 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH3P22223 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH3P22223 MTND4LP7-201ENST00000431728 294 ntBASIC5.07□□□□□ -1.6
CDH3P22223 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH3P22223 ARL5AP3-201ENST00000439327 386 ntBASIC5.07□□□□□ -1.6
CDH3P22223 Z99127.2-201ENST00000441426 334 ntBASIC5.07□□□□□ -1.6
CDH3P22223 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH3P22223 PTMAP3-201ENST00000447474 330 ntBASIC5.07□□□□□ -1.6
CDH3P22223 AC008410.1-201ENST00000483777 339 ntBASIC5.07□□□□□ -1.6
CDH3P22223 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH3P22223 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH3P22223 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH3P22223 HMGB1P19-201ENST00000517578 577 ntBASIC5.07□□□□□ -1.6
CDH3P22223 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH3P22223 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH3P22223 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH3P22223 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH3P22223 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.07□□□□□ -1.6
CDH3P22223 AC108738.1-201ENST00000603703 237 ntBASIC5.07□□□□□ -1.6
CDH3P22223 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.07□□□□□ -1.6
CDH3P22223 AL136370.1-201ENST00000608166 691 ntBASIC5.07□□□□□ -1.6
CDH3P22223 AC004241.3-201ENST00000611728 517 ntBASIC5.07□□□□□ -1.6
CDH3P22223 AC015871.5-202ENST00000623252 701 ntBASIC5.07□□□□□ -1.6
CDH3P22223 AC015908.5-201ENST00000623289 343 ntBASIC5.07□□□□□ -1.6
CDH3P22223 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CDH3P22223 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CDH3P22223 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
CDH3P22223 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDH3P22223 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH3P22223 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CDH3P22223 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH3P22223 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH3P22223 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH3P22223 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH3P22223 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH3P22223 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
CDH3P22223 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH3P22223 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH3P22223 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms