Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AC134879.1-201ENST00000426062 394 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC7.79□□□□□ -1.16
COL9A1P20849 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC7.79□□□□□ -1.16
COL9A1P20849 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC7.79□□□□□ -1.16
COL9A1P20849 MTCO3P45-201ENST00000443036 613 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.79□□□□□ -1.16
COL9A1P20849 AC073109.1-201ENST00000445066 978 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 AL161454.1-201ENST00000446226 569 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 MRPS21P1-201ENST00000453850 223 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 AC117395.2-201ENST00000463122 1128 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 AC008967.1-201ENST00000504843 163 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 AC116655.1-201ENST00000508324 901 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 AC093816.1-201ENST00000515076 913 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 MTND6P19-201ENST00000519399 524 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.79□□□□□ -1.16
COL9A1P20849 AP000857.1-201ENST00000532151 543 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.79□□□□□ -1.16
COL9A1P20849 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC7.79□□□□□ -1.16
COL9A1P20849 AC079598.4-201ENST00000549647 265 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.79□□□□□ -1.16
COL9A1P20849 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.79□□□□□ -1.16
COL9A1P20849 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL9A1P20849 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.79□□□□□ -1.16
COL9A1P20849 AC104695.3-201ENST00000604052 296 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 AL096855.2-201ENST00000605785 369 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 AL136097.3-201ENST00000611097 505 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 uc_338.37-201ENST00000620113 186 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
COL9A1P20849 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL9A1P20849 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL9A1P20849 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL9A1P20849 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
COL9A1P20849 AL161912.4-201ENST00000623889 2468 ntBASIC7.79□□□□□ -1.16
COL9A1P20849 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC7.79□□□□□ -1.16
COL9A1P20849 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL9A1P20849 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.79□□□□□ -1.16
COL9A1P20849 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC7.79□□□□□ -1.16
COL9A1P20849 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL9A1P20849 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL9A1P20849 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
COL9A1P20849 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL9A1P20849 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL9A1P20849 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL9A1P20849 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
COL9A1P20849 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
COL9A1P20849 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC7.78□□□□□ -1.16
COL9A1P20849 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 AL158163.1-201ENST00000603915 1649 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.78□□□□□ -1.16
COL9A1P20849 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC7.78□□□□□ -1.16
COL9A1P20849 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 LRRC37A11P-202ENST00000579258 3717 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 Y_RNA.152-201ENST00000363578 100 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 RNU6-266P-201ENST00000364225 107 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 SNORA62.2-201ENST00000364672 152 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 Y_RNA.291-201ENST00000364886 113 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
COL9A1P20849 Y_RNA.389-201ENST00000383924 113 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 Y_RNA.396-201ENST00000383949 103 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 SNORA10B-201ENST00000384458 133 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 RNU6-601P-201ENST00000384540 107 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 AL596448.1-201ENST00000415024 392 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC7.78□□□□□ -1.16
COL9A1P20849 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.78□□□□□ -1.16
COL9A1P20849 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC7.78□□□□□ -1.16
COL9A1P20849 AC009237.4-201ENST00000441078 238 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.78□□□□□ -1.16
COL9A1P20849 RPL35AP28-201ENST00000459730 331 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 SCARNA6.1-201ENST00000516989 238 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 AC107934.1-201ENST00000522215 217 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 COX6CP8-201ENST00000522620 226 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.78□□□□□ -1.16
COL9A1P20849 MIR4700-201ENST00000578311 74 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 MIR5682-201ENST00000584864 76 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.78□□□□□ -1.16
COL9A1P20849 AC092960.1-201ENST00000604762 351 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 CR381572.1-201ENST00000625098 102 ntBASIC7.78□□□□□ -1.16
COL9A1P20849 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.78□□□□□ -1.16
COL9A1P20849 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.78□□□□□ -1.16
COL9A1P20849 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.78□□□□□ -1.16
COL9A1P20849 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
COL9A1P20849 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
COL9A1P20849 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
COL9A1P20849 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL9A1P20849 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.78□□□□□ -1.16
COL9A1P20849 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms