Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
NFKB1P19838 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
NFKB1P19838 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.85□□□□□ -1.31
NFKB1P19838 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.84□□□□□ -1.31
NFKB1P19838 AC122713.2-201ENST00000624942 3335 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.84□□□□□ -1.31
NFKB1P19838 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
NFKB1P19838 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.84□□□□□ -1.31
NFKB1P19838 HSPA8P17-201ENST00000427029 1382 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 FRG1BP-201ENST00000278882 761 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
NFKB1P19838 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 OR56A4-201ENST00000330728 1209 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 FRG1CP-201ENST00000358464 769 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 RNU6-619P-201ENST00000365146 108 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 RNA5SP152-201ENST00000365184 110 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 RPS3AP36-201ENST00000398190 775 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 HMGB1P11-201ENST00000413899 637 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 ZNF90P2-204ENST00000419323 1075 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 MTND2P23-201ENST00000422990 651 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AC093084.1-201ENST00000424233 687 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 AC007559.1-201ENST00000428736 355 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.84□□□□□ -1.31
NFKB1P19838 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.84□□□□□ -1.31
NFKB1P19838 AC022364.2-201ENST00000457963 554 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AC112206.1-201ENST00000468416 477 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 RPL7P42-201ENST00000481005 679 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AC091544.1-201ENST00000484702 348 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.84□□□□□ -1.31
NFKB1P19838 AC063943.2-201ENST00000495697 534 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6.84□□□□□ -1.31
NFKB1P19838 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.84□□□□□ -1.31
NFKB1P19838 ARL2BPP5-201ENST00000523141 481 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.84□□□□□ -1.31
NFKB1P19838 SNRPCP6-201ENST00000528310 210 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.84□□□□□ -1.31
NFKB1P19838 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.84□□□□□ -1.31
NFKB1P19838 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.84□□□□□ -1.31
NFKB1P19838 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 AL512310.1-201ENST00000548639 172 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.84□□□□□ -1.31
NFKB1P19838 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.31
NFKB1P19838 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.84□□□□□ -1.31
NFKB1P19838 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.84□□□□□ -1.31
NFKB1P19838 NRBF2P5-201ENST00000603087 788 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AL359704.2-201ENST00000604335 521 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.84□□□□□ -1.31
NFKB1P19838 MIR8082-201ENST00000612488 81 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
NFKB1P19838 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AC073862.4-201ENST00000622982 854 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AC005858.3-201ENST00000624756 589 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.84□□□□□ -1.31
NFKB1P19838 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.84□□□□□ -1.31
NFKB1P19838 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
NFKB1P19838 AC093909.5-201ENST00000621839 1799 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 AC009120.2-204ENST00000621548 2032 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.84□□□□□ -1.31
NFKB1P19838 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
NFKB1P19838 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NFKB1P19838 AC015689.2-201ENST00000528172 1738 ntBASIC6.84□□□□□ -1.31
NFKB1P19838 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.84□□□□□ -1.32
NFKB1P19838 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.84□□□□□ -1.32
NFKB1P19838 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
NFKB1P19838 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
NFKB1P19838 ZNF37BP-203ENST00000452306 1352 ntBASIC6.83□□□□□ -1.32
NFKB1P19838 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NFKB1P19838 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NFKB1P19838 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.83□□□□□ -1.32
NFKB1P19838 AC107982.1-201ENST00000507171 1300 ntBASIC6.83□□□□□ -1.32
NFKB1P19838 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.83□□□□□ -1.32
NFKB1P19838 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
NFKB1P19838 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NFKB1P19838 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NFKB1P19838 OR2M1P-201ENST00000318104 951 ntBASIC6.83□□□□□ -1.32
NFKB1P19838 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
NFKB1P19838 RNU4-79P-201ENST00000362764 141 ntBASIC6.83□□□□□ -1.32
NFKB1P19838 SNORD56.2-201ENST00000363242 71 ntBASIC6.83□□□□□ -1.32
NFKB1P19838 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
NFKB1P19838 MIR138-2-201ENST00000384916 84 ntBASIC6.83□□□□□ -1.32
NFKB1P19838 VIM2P-201ENST00000402383 1294 ntBASIC6.83□□□□□ -1.32
NFKB1P19838 NACAP7-201ENST00000407371 609 ntBASIC6.83□□□□□ -1.32
NFKB1P19838 RPS3AP3-201ENST00000411933 242 ntBASIC6.83□□□□□ -1.32
NFKB1P19838 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.83□□□□□ -1.32
NFKB1P19838 AC009303.1-201ENST00000426307 352 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms