Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.37□□□□□ -1.55
PTPRFP10586 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.37□□□□□ -1.55
PTPRFP10586 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.37□□□□□ -1.55
PTPRFP10586 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTPRFP10586 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PTPRFP10586 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.37□□□□□ -1.55
PTPRFP10586 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTPRFP10586 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.36□□□□□ -1.55
PTPRFP10586 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPRFP10586 RPS29P17-201ENST00000430795 166 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPRFP10586 MTCO1P35-201ENST00000515270 228 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 NPM1P6-201ENST00000521088 871 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 AC068993.1-201ENST00000546724 589 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 AL049536.1-201ENST00000625043 744 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 ASNSP1-204ENST00000641977 1664 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPRFP10586 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.36□□□□□ -1.55
PTPRFP10586 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPRFP10586 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPRFP10586 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.36□□□□□ -1.55
PTPRFP10586 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPRFP10586 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPRFP10586 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPRFP10586 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPRFP10586 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPRFP10586 RNA5SP317-201ENST00000410176 116 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 RNA5SP311-201ENST00000411290 116 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPRFP10586 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.36□□□□□ -1.55
PTPRFP10586 HMGN2P27-201ENST00000427352 270 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 FTH1P16-201ENST00000435241 552 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.36□□□□□ -1.55
PTPRFP10586 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.36□□□□□ -1.55
PTPRFP10586 CYCSP24-201ENST00000445119 316 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.36□□□□□ -1.55
PTPRFP10586 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPRFP10586 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.36□□□□□ -1.55
PTPRFP10586 RN7SL98P-201ENST00000462271 300 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 NIFKP7-201ENST00000503365 834 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 PGBD4P4-201ENST00000509673 613 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 RNA5SP315-201ENST00000516340 116 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 RNA5SP143-201ENST00000516936 115 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 RNA5SP312-201ENST00000517068 116 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPRFP10586 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPRFP10586 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPRFP10586 AC008833.1-201ENST00000611633 691 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.36□□□□□ -1.55
PTPRFP10586 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPRFP10586 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPRFP10586 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPRFP10586 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPRFP10586 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPRFP10586 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPRFP10586 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPRFP10586 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.35□□□□□ -1.55
PTPRFP10586 ICE2P1-201ENST00000512800 1849 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTPRFP10586 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTPRFP10586 UGT2B26P-201ENST00000508672 1613 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 AC097063.1-201ENST00000426714 1797 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 AL731566.1-201ENST00000620490 1937 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 AC021146.4-201ENST00000309229 279 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPRFP10586 RPL12P18-201ENST00000437175 325 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTPRFP10586 AL162591.2-201ENST00000449634 317 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.35□□□□□ -1.55
PTPRFP10586 AC106806.2-201ENST00000509365 500 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPRFP10586 CYCSP40-201ENST00000575927 294 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 AL020997.2-201ENST00000602607 184 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPRFP10586 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
PTPRFP10586 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTPRFP10586 AL031119.1-201ENST00000404707 1879 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTPRFP10586 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTPRFP10586 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTPRFP10586 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.35□□□□□ -1.55
PTPRFP10586 E2F6P2-201ENST00000420708 748 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPRFP10586 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.35□□□□□ -1.55
PTPRFP10586 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.35□□□□□ -1.55
PTPRFP10586 RN7SL176P-201ENST00000580352 264 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 AC024941.1-201ENST00000612250 334 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 AL157762.1-201ENST00000619612 415 ntBASIC5.35□□□□□ -1.55
PTPRFP10586 AC005261.4-201ENST00000600047 1385 ntBASIC5.34□□□□□ -1.55
PTPRFP10586 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
PTPRFP10586 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTPRFP10586 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTPRFP10586 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTPRFP10586 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTPRFP10586 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
PTPRFP10586 AC104118.1-201ENST00000607625 1589 ntBASIC5.34□□□□□ -1.55
PTPRFP10586 U3.35-201ENST00000408405 208 ntBASIC5.34□□□□□ -1.55
PTPRFP10586 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.34□□□□□ -1.55
PTPRFP10586 AC023424.1-201ENST00000496058 459 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms