Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC116667.2-201ENST00000641075 823 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC119674.1-212ENST00000641155 993 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 RPS4XP5-202ENST00000449995 1334 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC104162.1-201ENST00000430831 2382 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 TTC39DP-201ENST00000416781 1688 ntBASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CSB-PGBD3P0DP91 AC005261.2-201ENST00000593427 4258 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AC027088.4-201ENST00000611559 1947 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 Y_RNA.192-201ENST00000363977 102 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 RNA5SP478-201ENST00000364657 115 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 VDAC2P1-201ENST00000399358 958 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AC136624.1-201ENST00000400791 413 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 RN7SKP166-201ENST00000410812 305 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 RN7SKP142-201ENST00000411236 328 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AL109741.2-201ENST00000455561 343 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 SNX18P26-201ENST00000458433 740 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AC073610.1-201ENST00000489971 396 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AL024509.2-201ENST00000493462 493 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 RPS6P4-201ENST00000494693 758 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 ARL4AP1-201ENST00000503220 705 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 DSTNP2-201ENST00000504533 515 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AC083923.1-201ENST00000523708 376 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AP001804.1-201ENST00000526868 919 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AP000662.1-201ENST00000530952 487 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 CASC16-202ENST00000563844 610 ntTSL 3 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 OR7E18P-201ENST00000592589 702 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AC068790.7-201ENST00000602347 528 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 MIR6719-201ENST00000622428 87 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AC004009.2-201ENST00000623016 728 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AL359757.1-201ENST00000623176 255 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 MIR193BHG-214ENST00000641765 509 ntBASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC8.17□□□□□ -1.1
CSB-PGBD3P0DP91 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 OR13C1P-202ENST00000641378 2919 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 OR3A2-201ENST00000408891 1076 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 TCEA1P4-201ENST00000415066 844 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 RPS27AP7-201ENST00000422792 455 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 RPL21P43-201ENST00000425440 472 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 RWDD4P2-201ENST00000426392 563 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 DPY19L1P2-201ENST00000426647 915 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 ATP8A2P3-201ENST00000426792 1536 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC234064.1-201ENST00000436312 247 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AL354941.1-201ENST00000438600 464 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC093392.2-201ENST00000450682 337 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms