Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC010350.1-201ENST00000504908 231 ntBASIC4.8□□□□□ -1.64
LSM1O15116 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.8□□□□□ -1.64
LSM1O15116 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.8□□□□□ -1.64
LSM1O15116 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.8□□□□□ -1.64
LSM1O15116 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.8□□□□□ -1.64
LSM1O15116 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.8□□□□□ -1.64
LSM1O15116 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LSM1O15116 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.8□□□□□ -1.64
LSM1O15116 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.8□□□□□ -1.64
LSM1O15116 FAM106CP-201ENST00000582212 507 ntBASIC4.8□□□□□ -1.64
LSM1O15116 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.8□□□□□ -1.64
LSM1O15116 AC104687.2-201ENST00000604442 342 ntBASIC4.8□□□□□ -1.64
LSM1O15116 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.8□□□□□ -1.64
LSM1O15116 AP005212.4-201ENST00000614206 710 ntBASIC4.8□□□□□ -1.64
LSM1O15116 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.8□□□□□ -1.64
LSM1O15116 SMG1P6-201ENST00000532337 2930 ntBASIC4.8□□□□□ -1.64
LSM1O15116 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
LSM1O15116 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LSM1O15116 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LSM1O15116 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.8□□□□□ -1.64
LSM1O15116 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LSM1O15116 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LSM1O15116 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.79□□□□□ -1.64
LSM1O15116 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LSM1O15116 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LSM1O15116 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.79□□□□□ -1.64
LSM1O15116 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LSM1O15116 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LSM1O15116 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LSM1O15116 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LSM1O15116 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LSM1O15116 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.79□□□□□ -1.64
LSM1O15116 RNU6-984P-201ENST00000363236 109 ntBASIC4.79□□□□□ -1.64
LSM1O15116 RN7SKP15-201ENST00000364742 309 ntBASIC4.79□□□□□ -1.64
LSM1O15116 SNORA70.10-201ENST00000384515 134 ntBASIC4.79□□□□□ -1.64
LSM1O15116 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LSM1O15116 DUTP5-201ENST00000406790 469 ntBASIC4.79□□□□□ -1.64
LSM1O15116 RPL23AP48-201ENST00000406913 488 ntBASIC4.79□□□□□ -1.64
LSM1O15116 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LSM1O15116 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.79□□□□□ -1.64
LSM1O15116 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.79□□□□□ -1.64
LSM1O15116 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.79□□□□□ -1.64
LSM1O15116 SLC35E1P1-201ENST00000419313 864 ntBASIC4.79□□□□□ -1.64
LSM1O15116 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.79□□□□□ -1.64
LSM1O15116 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.79□□□□□ -1.64
LSM1O15116 AC079807.1-201ENST00000429993 481 ntBASIC4.79□□□□□ -1.64
LSM1O15116 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.79□□□□□ -1.64
LSM1O15116 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.79□□□□□ -1.64
LSM1O15116 KNOP1P3-201ENST00000446933 426 ntBASIC4.79□□□□□ -1.64
LSM1O15116 RPL10P17-201ENST00000453852 316 ntBASIC4.79□□□□□ -1.64
LSM1O15116 AL445433.1-201ENST00000457507 257 ntBASIC4.79□□□□□ -1.64
LSM1O15116 RN7SL517P-201ENST00000462240 305 ntBASIC4.79□□□□□ -1.64
LSM1O15116 RPS26P39-201ENST00000469206 341 ntBASIC4.79□□□□□ -1.64
LSM1O15116 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.79□□□□□ -1.64
LSM1O15116 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.79□□□□□ -1.64
LSM1O15116 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.79□□□□□ -1.64
LSM1O15116 RNA5SP228-201ENST00000516232 133 ntBASIC4.79□□□□□ -1.64
LSM1O15116 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.79□□□□□ -1.64
LSM1O15116 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.79□□□□□ -1.64
LSM1O15116 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.79□□□□□ -1.64
LSM1O15116 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.79□□□□□ -1.64
LSM1O15116 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.79□□□□□ -1.64
LSM1O15116 AC090888.3-201ENST00000558917 509 ntBASIC4.79□□□□□ -1.64
LSM1O15116 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.79□□□□□ -1.64
LSM1O15116 SULT1C2P2-201ENST00000562517 294 ntBASIC4.79□□□□□ -1.64
LSM1O15116 CYCSP40-201ENST00000575927 294 ntBASIC4.79□□□□□ -1.64
LSM1O15116 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.79□□□□□ -1.64
LSM1O15116 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.79□□□□□ -1.64
LSM1O15116 CASC19-222ENST00000641321 1173 ntBASIC4.79□□□□□ -1.64
LSM1O15116 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LSM1O15116 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LSM1O15116 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LSM1O15116 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LSM1O15116 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.79□□□□□ -1.64
LSM1O15116 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.79□□□□□ -1.64
LSM1O15116 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.79□□□□□ -1.64
LSM1O15116 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
LSM1O15116 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.79□□□□□ -1.64
LSM1O15116 AC068254.2-201ENST00000623938 3577 ntBASIC4.79□□□□□ -1.64
LSM1O15116 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LSM1O15116 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.79□□□□□ -1.64
LSM1O15116 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
LSM1O15116 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.78□□□□□ -1.64
LSM1O15116 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LSM1O15116 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LSM1O15116 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LSM1O15116 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LSM1O15116 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LSM1O15116 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LSM1O15116 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LSM1O15116 OR3A2-201ENST00000408891 1076 ntBASIC4.78□□□□□ -1.64
LSM1O15116 RN7SKP126-201ENST00000411143 300 ntBASIC4.78□□□□□ -1.64
LSM1O15116 AC009237.10-201ENST00000414112 510 ntBASIC4.78□□□□□ -1.64
LSM1O15116 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.78□□□□□ -1.64
LSM1O15116 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.78□□□□□ -1.64
LSM1O15116 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.78□□□□□ -1.64
LSM1O15116 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.78□□□□□ -1.64
LSM1O15116 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.78□□□□□ -1.64
LSM1O15116 CFL1P1-202ENST00000432948 411 ntBASIC4.78□□□□□ -1.64
LSM1O15116 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms