Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PDLIM1O00151 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PDLIM1O00151 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.83□□□□□ -1.64
PDLIM1O00151 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM1O00151 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM1O00151 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM1O00151 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.83□□□□□ -1.64
PDLIM1O00151 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PDLIM1O00151 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM1O00151 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM1O00151 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 MTCO1P11-201ENST00000429111 1528 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDLIM1O00151 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.82□□□□□ -1.64
PDLIM1O00151 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDLIM1O00151 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 RNA5SP183-201ENST00000362452 119 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 RN7SKP162-201ENST00000363605 345 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 AL353625.1-202ENST00000366273 571 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDLIM1O00151 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDLIM1O00151 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM1O00151 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.82□□□□□ -1.64
PDLIM1O00151 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.82□□□□□ -1.64
PDLIM1O00151 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.82□□□□□ -1.64
PDLIM1O00151 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM1O00151 AC105399.1-202ENST00000447303 205 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 RN7SL51P-201ENST00000468230 285 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
PDLIM1O00151 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 RNA5SP154-201ENST00000516193 111 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM1O00151 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM1O00151 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM1O00151 AGGF1P9-201ENST00000561884 913 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 AC007225.2-201ENST00000562529 256 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM1O00151 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM1O00151 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.82□□□□□ -1.64
PDLIM1O00151 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 AC008638.3-201ENST00000603341 463 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 AC074276.2-201ENST00000619891 348 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
PDLIM1O00151 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM1O00151 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
PDLIM1O00151 KARSP3-201ENST00000571212 1504 ntBASIC4.82□□□□□ -1.64
PDLIM1O00151 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PDLIM1O00151 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PDLIM1O00151 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.81□□□□□ -1.64
PDLIM1O00151 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM1O00151 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.81□□□□□ -1.64
PDLIM1O00151 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM1O00151 RNU6-984P-201ENST00000363236 109 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 RNA5SP335-201ENST00000363817 110 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 RNU6-819P-201ENST00000364116 107 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.81□□□□□ -1.64
PDLIM1O00151 MIR195-201ENST00000385194 87 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 HMGB3P7-201ENST00000400214 611 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 AC009804.1-201ENST00000400949 179 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 OR4K12P-201ENST00000406538 961 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 DHFRP5-201ENST00000406944 564 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 RN7SKP229-201ENST00000410465 302 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 NPM1P4-201ENST00000414095 812 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 SRSF1P1-201ENST00000424058 520 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM1O00151 AL139148.1-201ENST00000427122 680 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 AC005033.1-201ENST00000428904 813 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.81□□□□□ -1.64
PDLIM1O00151 Z85994.2-201ENST00000434327 452 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 AL392003.1-201ENST00000434394 243 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 CYCSP12-201ENST00000437729 300 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM1O00151 GEMIN8P3-201ENST00000445417 720 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.81□□□□□ -1.64
PDLIM1O00151 RPL7P45-201ENST00000455851 743 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 RPL31P53-201ENST00000457065 348 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms