Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 ZNF602P-201ENST00000405929 924 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 UBE2V1P11-201ENST00000411559 285 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 PCNPP4-201ENST00000414817 517 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 HMGB3P5-201ENST00000428894 612 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC009238.2-201ENST00000431026 355 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 TPTE2P3-201ENST00000441562 1189 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC020898.1-201ENST00000474167 787 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 RPL7P40-201ENST00000481703 745 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC107398.1-201ENST00000486904 505 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 RN7SL466P-201ENST00000497546 295 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 IGHV3-63-201ENST00000518422 341 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AP001207.2-201ENST00000519490 539 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC013701.1-201ENST00000522657 465 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC006349.1-201ENST00000555526 235 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC127381.1-201ENST00000555979 939 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AP001160.4-201ENST00000596971 382 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC084373.1-201ENST00000603311 235 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC068313.1-201ENST00000604028 1008 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC093673.2-201ENST00000609674 331 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 SAMMSON-227ENST00000642114 1199 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AC112198.2-201ENST00000426589 6996 ntBASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC235565.1-201ENST00000456962 1325 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 OR8V1P-201ENST00000395193 873 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 ATP5HP3-201ENST00000396994 486 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC013442.1-201ENST00000397347 228 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 PEX12P1-201ENST00000400284 1048 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AL133325.1-201ENST00000421090 382 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC104333.2-201ENST00000422630 192 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 MTND2P2-201ENST00000434633 945 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AL161722.2-201ENST00000434731 981 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AL138899.2-201ENST00000439139 499 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 MED6P1-201ENST00000439659 713 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 SIAH1P1-201ENST00000479411 923 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 RN7SL184P-201ENST00000488308 297 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AP006245.2-201ENST00000522004 300 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 OR8G5-201ENST00000524943 1041 ntBASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.25□□□□□ -1.57
TCRBV7S3A2A0A539 AL049830.4-201ENST00000555149 351 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms