Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC32.65■■■□□ 2.82
BIVM-ERCC5R4GMW8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
BIVM-ERCC5R4GMW8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
BIVM-ERCC5R4GMW8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
BIVM-ERCC5R4GMW8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC32.65■■■□□ 2.82
BIVM-ERCC5R4GMW8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
BIVM-ERCC5R4GMW8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC32.65■■■□□ 2.82
BIVM-ERCC5R4GMW8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC32.65■■■□□ 2.82
BIVM-ERCC5R4GMW8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
BIVM-ERCC5R4GMW8 KRT8P45-201ENST00000414328 1447 ntBASIC32.64■■■□□ 2.82
BIVM-ERCC5R4GMW8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
BIVM-ERCC5R4GMW8 AC069148.1-201ENST00000608741 768 ntBASIC32.64■■■□□ 2.82
BIVM-ERCC5R4GMW8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
BIVM-ERCC5R4GMW8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC32.64■■■□□ 2.82
BIVM-ERCC5R4GMW8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC32.64■■■□□ 2.82
BIVM-ERCC5R4GMW8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC32.64■■■□□ 2.82
BIVM-ERCC5R4GMW8 LINC00565-201ENST00000562710 2331 ntBASIC32.64■■■□□ 2.82
BIVM-ERCC5R4GMW8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 SPDYE15P-201ENST00000424157 909 ntBASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 IER3-202ENST00000376377 1350 ntBASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
BIVM-ERCC5R4GMW8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 SPDYE13P-201ENST00000445314 798 ntBASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 NEK4P2-201ENST00000580004 1012 ntBASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 AL121894.2-201ENST00000602977 491 ntBASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
BIVM-ERCC5R4GMW8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
BIVM-ERCC5R4GMW8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
BIVM-ERCC5R4GMW8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
BIVM-ERCC5R4GMW8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC32.61■■■□□ 2.81
BIVM-ERCC5R4GMW8 AC112907.2-201ENST00000448639 330 ntBASIC32.61■■■□□ 2.81
BIVM-ERCC5R4GMW8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC32.61■■■□□ 2.81
BIVM-ERCC5R4GMW8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC32.61■■■□□ 2.81
BIVM-ERCC5R4GMW8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC32.61■■■□□ 2.81
BIVM-ERCC5R4GMW8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC32.61■■■□□ 2.81
BIVM-ERCC5R4GMW8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
BIVM-ERCC5R4GMW8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC32.6■■■□□ 2.81
BIVM-ERCC5R4GMW8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC32.6■■■□□ 2.81
BIVM-ERCC5R4GMW8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC32.6■■■□□ 2.81
BIVM-ERCC5R4GMW8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
BIVM-ERCC5R4GMW8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
BIVM-ERCC5R4GMW8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
BIVM-ERCC5R4GMW8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
BIVM-ERCC5R4GMW8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC32.6■■■□□ 2.81
BIVM-ERCC5R4GMW8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC32.6■■■□□ 2.81
BIVM-ERCC5R4GMW8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
BIVM-ERCC5R4GMW8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
BIVM-ERCC5R4GMW8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 KRT18P56-201ENST00000507275 550 ntBASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 GOLGA2P11-201ENST00000562660 1621 ntBASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC32.59■■■□□ 2.81
BIVM-ERCC5R4GMW8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
BIVM-ERCC5R4GMW8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC32.58■■■□□ 2.81
BIVM-ERCC5R4GMW8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
BIVM-ERCC5R4GMW8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC32.58■■■□□ 2.81
BIVM-ERCC5R4GMW8 KRT18P48-201ENST00000434763 852 ntBASIC32.58■■■□□ 2.81
BIVM-ERCC5R4GMW8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC32.58■■■□□ 2.81
BIVM-ERCC5R4GMW8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
BIVM-ERCC5R4GMW8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC32.58■■■□□ 2.81
BIVM-ERCC5R4GMW8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC32.57■■■□□ 2.8
BIVM-ERCC5R4GMW8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC32.57■■■□□ 2.8
BIVM-ERCC5R4GMW8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC32.57■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms