Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AP000523.1-201ENST00000398242 1049 ntBASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 ZNF444P1-201ENST00000559497 298 ntBASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 AC083849.1-201ENST00000615227 514 ntBASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 AL691432.3-201ENST00000621860 400 ntBASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 LINC01465-201ENST00000408887 1940 ntBASIC24.67■■□□□ 1.54
RTCBQ9Y3I0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTCBQ9Y3I0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 KRT8P41-201ENST00000533985 1514 ntBASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTCBQ9Y3I0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.64■■□□□ 1.54
RTCBQ9Y3I0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
RTCBQ9Y3I0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
RTCBQ9Y3I0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
RTCBQ9Y3I0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RTCBQ9Y3I0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RTCBQ9Y3I0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RTCBQ9Y3I0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RTCBQ9Y3I0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RTCBQ9Y3I0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
RTCBQ9Y3I0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC24.64■■□□□ 1.54
RTCBQ9Y3I0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RTCBQ9Y3I0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC24.64■■□□□ 1.53
RTCBQ9Y3I0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RTCBQ9Y3I0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 HYMAI.1-201ENST00000620949 238 ntBASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 AC012313.10-201ENST00000623509 926 ntBASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
RTCBQ9Y3I0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 STARP1-201ENST00000397973 869 ntBASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTCBQ9Y3I0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms