Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 NBPF21P-201ENST00000425093 1451 ntBASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 Z82202.1-201ENST00000623446 1880 ntBASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 TUBB8P6-201ENST00000436895 1288 ntBASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 KRT8P8-201ENST00000434750 1448 ntBASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
AP4E1Q9UPM8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 AL023875.1-201ENST00000640777 796 ntBASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.23■□□□□ 0.83
AP4E1Q9UPM8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 AC239809.2-201ENST00000415381 517 ntBASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 AC128676.1-201ENST00000454392 318 ntBASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.22■□□□□ 0.83
AP4E1Q9UPM8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 KRASP1-201ENST00000407852 552 ntBASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.21■□□□□ 0.83
AP4E1Q9UPM8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms