Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPASTQ9UBP0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SPASTQ9UBP0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 NIFKP9-201ENST00000419265 221 ntBASIC19.39■□□□□ 0.69
SPASTQ9UBP0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 AC097493.4-201ENST00000641197 219 ntBASIC19.39■□□□□ 0.69
SPASTQ9UBP0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 AL391422.3-201ENST00000603791 2761 ntBASIC19.39■□□□□ 0.69
SPASTQ9UBP0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPASTQ9UBP0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 AC116351.2-201ENST00000606540 1585 ntBASIC19.38■□□□□ 0.69
SPASTQ9UBP0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 CR392000.1-201ENST00000624770 1228 ntBASIC19.38■□□□□ 0.69
SPASTQ9UBP0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPASTQ9UBP0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 PCDHAC2-203ENST00000615316 3011 ntBASIC19.37■□□□□ 0.69
SPASTQ9UBP0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 KRT16P1-201ENST00000399124 1418 ntBASIC19.37■□□□□ 0.69
SPASTQ9UBP0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.37■□□□□ 0.69
SPASTQ9UBP0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 UNC93B2-201ENST00000285383 730 ntBASIC19.36■□□□□ 0.69
SPASTQ9UBP0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.36■□□□□ 0.69
SPASTQ9UBP0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms