Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.17■□□□□ 0.98
CDT1Q9H211 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.17■□□□□ 0.98
CDT1Q9H211 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.17■□□□□ 0.98
CDT1Q9H211 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.17■□□□□ 0.98
CDT1Q9H211 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.17■□□□□ 0.98
CDT1Q9H211 AC131212.4-201ENST00000623606 975 ntBASIC21.17■□□□□ 0.98
CDT1Q9H211 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDT1Q9H211 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
CDT1Q9H211 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDT1Q9H211 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.17■□□□□ 0.98
CDT1Q9H211 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.17■□□□□ 0.98
CDT1Q9H211 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.17■□□□□ 0.98
CDT1Q9H211 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.16■□□□□ 0.98
CDT1Q9H211 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.16■□□□□ 0.98
CDT1Q9H211 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDT1Q9H211 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDT1Q9H211 LINC01465-201ENST00000408887 1940 ntBASIC21.16■□□□□ 0.98
CDT1Q9H211 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDT1Q9H211 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDT1Q9H211 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CDT1Q9H211 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDT1Q9H211 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.16■□□□□ 0.98
CDT1Q9H211 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.16■□□□□ 0.98
CDT1Q9H211 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.16■□□□□ 0.98
CDT1Q9H211 AC073912.3-201ENST00000624414 853 ntBASIC21.16■□□□□ 0.98
CDT1Q9H211 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDT1Q9H211 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDT1Q9H211 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.16■□□□□ 0.98
CDT1Q9H211 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDT1Q9H211 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDT1Q9H211 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.15■□□□□ 0.98
CDT1Q9H211 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CDT1Q9H211 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDT1Q9H211 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDT1Q9H211 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDT1Q9H211 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDT1Q9H211 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDT1Q9H211 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDT1Q9H211 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.15■□□□□ 0.98
CDT1Q9H211 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CDT1Q9H211 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDT1Q9H211 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CDT1Q9H211 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDT1Q9H211 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.15■□□□□ 0.98
CDT1Q9H211 B3GAT3P1-201ENST00000471720 806 ntBASIC21.15■□□□□ 0.98
CDT1Q9H211 AC011506.1-201ENST00000474329 610 ntBASIC21.15■□□□□ 0.98
CDT1Q9H211 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDT1Q9H211 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.15■□□□□ 0.98
CDT1Q9H211 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.15■□□□□ 0.98
CDT1Q9H211 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.15■□□□□ 0.98
CDT1Q9H211 MIR6786-201ENST00000616843 113 ntBASIC21.15■□□□□ 0.98
CDT1Q9H211 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDT1Q9H211 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.15■□□□□ 0.98
CDT1Q9H211 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDT1Q9H211 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDT1Q9H211 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.15■□□□□ 0.98
CDT1Q9H211 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.15■□□□□ 0.98
CDT1Q9H211 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CDT1Q9H211 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.15■□□□□ 0.98
CDT1Q9H211 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.15■□□□□ 0.98
CDT1Q9H211 AC079598.2-202ENST00000546624 1451 ntBASIC21.14■□□□□ 0.98
CDT1Q9H211 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDT1Q9H211 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDT1Q9H211 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDT1Q9H211 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDT1Q9H211 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.14■□□□□ 0.97
CDT1Q9H211 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.14■□□□□ 0.97
CDT1Q9H211 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CDT1Q9H211 Z85996.1-201ENST00000494644 937 ntBASIC21.14■□□□□ 0.97
CDT1Q9H211 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.14■□□□□ 0.97
CDT1Q9H211 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.14■□□□□ 0.97
CDT1Q9H211 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.14■□□□□ 0.97
CDT1Q9H211 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.14■□□□□ 0.97
CDT1Q9H211 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CDT1Q9H211 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDT1Q9H211 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CDT1Q9H211 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CDT1Q9H211 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.14■□□□□ 0.97
CDT1Q9H211 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDT1Q9H211 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDT1Q9H211 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.14■□□□□ 0.97
CDT1Q9H211 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDT1Q9H211 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDT1Q9H211 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDT1Q9H211 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDT1Q9H211 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDT1Q9H211 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDT1Q9H211 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.13■□□□□ 0.97
CDT1Q9H211 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.13■□□□□ 0.97
CDT1Q9H211 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDT1Q9H211 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDT1Q9H211 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.13■□□□□ 0.97
CDT1Q9H211 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDT1Q9H211 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.13■□□□□ 0.97
CDT1Q9H211 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.13■□□□□ 0.97
CDT1Q9H211 AP000525.1-201ENST00000608286 694 ntBASIC21.13■□□□□ 0.97
CDT1Q9H211 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CDT1Q9H211 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.13■□□□□ 0.97
CDT1Q9H211 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDT1Q9H211 AC125437.2-201ENST00000625180 2167 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms