Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 RPS2P52-201ENST00000469610 820 ntBASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 AP006294.2-201ENST00000641667 209 ntBASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
COX4I2Q96KJ9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.02■□□□□ 0.47
COX4I2Q96KJ9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
COX4I2Q96KJ9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COX4I2Q96KJ9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
COX4I2Q96KJ9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 AC121338.2-201ENST00000622535 1744 ntBASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 AC009237.3-201ENST00000393279 1427 ntBASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COX4I2Q96KJ9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 AC012313.1-201ENST00000593393 3059 ntBASIC18■□□□□ 0.47
COX4I2Q96KJ9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COX4I2Q96KJ9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COX4I2Q96KJ9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18■□□□□ 0.47
COX4I2Q96KJ9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
COX4I2Q96KJ9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 LBX2-AS1-202ENST00000603175 2083 ntBASIC18■□□□□ 0.47
COX4I2Q96KJ9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COX4I2Q96KJ9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
COX4I2Q96KJ9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COX4I2Q96KJ9 AC139713.2-201ENST00000641328 2723 ntBASIC18■□□□□ 0.47
COX4I2Q96KJ9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 AC135050.7-201ENST00000624508 2218 ntBASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 AC098590.1-201ENST00000468126 897 ntBASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 AC010536.3-201ENST00000620306 533 ntBASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COX4I2Q96KJ9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 996.6 ms