Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.58■□□□□ 0.73
HMGB4Q8WW32 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HMGB4Q8WW32 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 SLC25A1P2-201ENST00000430693 912 ntBASIC19.57■□□□□ 0.72
HMGB4Q8WW32 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 Z85996.1-201ENST00000494644 937 ntBASIC19.57■□□□□ 0.72
HMGB4Q8WW32 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGB4Q8WW32 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 BX119927.1-201ENST00000636596 1552 ntBASIC19.56■□□□□ 0.72
HMGB4Q8WW32 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HMGB4Q8WW32 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 RNF152P1-201ENST00000397754 604 ntBASIC19.55■□□□□ 0.72
HMGB4Q8WW32 AC007663.1-201ENST00000438948 1240 ntBASIC19.55■□□□□ 0.72
HMGB4Q8WW32 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 AL138966.2-201ENST00000621997 464 ntBASIC19.55■□□□□ 0.72
HMGB4Q8WW32 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 AL358472.4-201ENST00000633140 710 ntBASIC19.55■□□□□ 0.72
HMGB4Q8WW32 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGB4Q8WW32 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 UPK3BP1-201ENST00000428678 509 ntBASIC19.54■□□□□ 0.72
HMGB4Q8WW32 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGB4Q8WW32 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms