Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 KRT8P8-201ENST00000434750 1448 ntBASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 TUBB8P6-201ENST00000436895 1288 ntBASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 MTDHP1-201ENST00000605323 784 ntBASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM35BQ8NCS4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 AC007952.6-201ENST00000573168 2673 ntBASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 AC003957.1-201ENST00000625108 2673 ntBASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 AC233263.1-201ENST00000578059 224 ntBASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 AC005332.7-201ENST00000614046 2005 ntBASIC20.65■□□□□ 0.9
TMEM35BQ8NCS4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM35BQ8NCS4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM35BQ8NCS4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
TMEM35BQ8NCS4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.64■□□□□ 0.9
TMEM35BQ8NCS4 NBPF21P-201ENST00000425093 1451 ntBASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 Z82202.1-201ENST00000623446 1880 ntBASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35BQ8NCS4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms