Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 TUBB8P6-201ENST00000436895 1288 ntBASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 KRT18P16-201ENST00000510337 1294 ntBASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LDLRAP1Q5SW96 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 AL020996.1-203ENST00000536896 2307 ntBASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 UBE2SP1-201ENST00000450587 669 ntBASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDLRAP1Q5SW96 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LDLRAP1Q5SW96 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LDLRAP1Q5SW96 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDLRAP1Q5SW96 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDLRAP1Q5SW96 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms