Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Gm9194-201ENSMUST00000220749 1447 ntBASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-1Q5R1I8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-1Q5R1I8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-1Q5R1I8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Mir6236-201ENSMUST00000184437 123 ntBASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Pkd1-207ENSMUST00000228550 1050 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms