Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 BX088651.1-201ENST00000540551 451 ntBASIC17.19■□□□□ 0.34
FREM1Q5H8C1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 C2orf69P3-201ENST00000565542 1120 ntBASIC17.19■□□□□ 0.34
FREM1Q5H8C1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.19■□□□□ 0.34
FREM1Q5H8C1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM1Q5H8C1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 AC026271.3-201ENST00000571884 352 ntBASIC17.18■□□□□ 0.34
FREM1Q5H8C1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 LINC01465-201ENST00000408887 1940 ntBASIC17.18■□□□□ 0.34
FREM1Q5H8C1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 KRT17P2-201ENST00000300992 1314 ntBASIC17.18■□□□□ 0.34
FREM1Q5H8C1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FREM1Q5H8C1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.17■□□□□ 0.34
FREM1Q5H8C1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 AC073912.3-201ENST00000624414 853 ntBASIC17.16■□□□□ 0.34
FREM1Q5H8C1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.16■□□□□ 0.34
FREM1Q5H8C1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 Z82202.1-201ENST00000623446 1880 ntBASIC17.16■□□□□ 0.34
FREM1Q5H8C1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 CR392000.1-201ENST00000624770 1228 ntBASIC17.16■□□□□ 0.34
FREM1Q5H8C1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.16■□□□□ 0.34
FREM1Q5H8C1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FREM1Q5H8C1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FREM1Q5H8C1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FREM1Q5H8C1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.15■□□□□ 0.34
FREM1Q5H8C1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.15■□□□□ 0.34
FREM1Q5H8C1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms