Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HERC4Q5GLZ8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HERC4Q5GLZ8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HERC4Q5GLZ8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
HERC4Q5GLZ8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HERC4Q5GLZ8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.8■■□□□ 1.08
HERC4Q5GLZ8 KRT17P2-201ENST00000300992 1314 ntBASIC21.8■■□□□ 1.08
HERC4Q5GLZ8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
HERC4Q5GLZ8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 AC012618.2-201ENST00000428058 849 ntBASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HERC4Q5GLZ8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 AL445228.2-201ENST00000605589 952 ntBASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 AL121829.2-201ENST00000620908 328 ntBASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 AC133561.5-201ENST00000635547 218 ntBASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
HERC4Q5GLZ8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 RCN1P1-201ENST00000400413 996 ntBASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 AC233702.5-201ENST00000584107 538 ntBASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.77■■□□□ 1.08
HERC4Q5GLZ8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.77■■□□□ 1.07
HERC4Q5GLZ8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HERC4Q5GLZ8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.76■■□□□ 1.07
HERC4Q5GLZ8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HERC4Q5GLZ8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HERC4Q5GLZ8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HERC4Q5GLZ8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HERC4Q5GLZ8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.75■■□□□ 1.07
HERC4Q5GLZ8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HERC4Q5GLZ8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.75■■□□□ 1.07
HERC4Q5GLZ8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.75■■□□□ 1.07
HERC4Q5GLZ8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
HERC4Q5GLZ8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HERC4Q5GLZ8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.75■■□□□ 1.07
HERC4Q5GLZ8 AC097493.4-201ENST00000641197 219 ntBASIC21.75■■□□□ 1.07
HERC4Q5GLZ8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms