Protein–RNA interactions for Protein: Q5GH77

XKR3, XK-related protein 3, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XKR3Q5GH77 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
XKR3Q5GH77 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
XKR3Q5GH77 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
XKR3Q5GH77 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
XKR3Q5GH77 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
XKR3Q5GH77 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
XKR3Q5GH77 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
XKR3Q5GH77 AC079598.2-202ENST00000546624 1451 ntBASIC21.64■■□□□ 1.05
XKR3Q5GH77 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
XKR3Q5GH77 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
XKR3Q5GH77 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
XKR3Q5GH77 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
XKR3Q5GH77 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
XKR3Q5GH77 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XKR3Q5GH77 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
XKR3Q5GH77 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XKR3Q5GH77 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.63■■□□□ 1.05
XKR3Q5GH77 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XKR3Q5GH77 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
XKR3Q5GH77 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XKR3Q5GH77 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.63■■□□□ 1.05
XKR3Q5GH77 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XKR3Q5GH77 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XKR3Q5GH77 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.63■■□□□ 1.05
XKR3Q5GH77 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.63■■□□□ 1.05
XKR3Q5GH77 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.63■■□□□ 1.05
XKR3Q5GH77 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XKR3Q5GH77 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XKR3Q5GH77 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.63■■□□□ 1.05
XKR3Q5GH77 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
XKR3Q5GH77 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
XKR3Q5GH77 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
XKR3Q5GH77 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.62■■□□□ 1.05
XKR3Q5GH77 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
XKR3Q5GH77 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
XKR3Q5GH77 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
XKR3Q5GH77 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
XKR3Q5GH77 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.62■■□□□ 1.05
XKR3Q5GH77 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.62■■□□□ 1.05
XKR3Q5GH77 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.62■■□□□ 1.05
XKR3Q5GH77 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.62■■□□□ 1.05
XKR3Q5GH77 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.62■■□□□ 1.05
XKR3Q5GH77 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.62■■□□□ 1.05
XKR3Q5GH77 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.62■■□□□ 1.05
XKR3Q5GH77 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
XKR3Q5GH77 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
XKR3Q5GH77 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.62■■□□□ 1.05
XKR3Q5GH77 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.62■■□□□ 1.05
XKR3Q5GH77 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
XKR3Q5GH77 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
XKR3Q5GH77 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
XKR3Q5GH77 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.61■■□□□ 1.05
XKR3Q5GH77 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 MMP23A-201ENST00000234610 1017 ntBASIC21.61■■□□□ 1.05
XKR3Q5GH77 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 AC087499.1-201ENST00000418141 1075 ntBASIC21.61■■□□□ 1.05
XKR3Q5GH77 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.61■■□□□ 1.05
XKR3Q5GH77 AL160286.2-201ENST00000567150 934 ntBASIC21.61■■□□□ 1.05
XKR3Q5GH77 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 AP000525.1-201ENST00000608286 694 ntBASIC21.61■■□□□ 1.05
XKR3Q5GH77 AC130371.2-201ENST00000619443 611 ntBASIC21.61■■□□□ 1.05
XKR3Q5GH77 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.61■■□□□ 1.05
XKR3Q5GH77 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
XKR3Q5GH77 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.61■■□□□ 1.05
XKR3Q5GH77 RCC2P6-201ENST00000526625 1557 ntBASIC21.61■■□□□ 1.05
XKR3Q5GH77 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XKR3Q5GH77 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
XKR3Q5GH77 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
XKR3Q5GH77 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
XKR3Q5GH77 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
XKR3Q5GH77 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.6■■□□□ 1.05
XKR3Q5GH77 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.6■■□□□ 1.05
XKR3Q5GH77 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
XKR3Q5GH77 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
XKR3Q5GH77 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
XKR3Q5GH77 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
XKR3Q5GH77 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
XKR3Q5GH77 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
XKR3Q5GH77 AC211429.1-201ENST00000415277 523 ntBASIC21.6■■□□□ 1.05
XKR3Q5GH77 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
XKR3Q5GH77 Z85996.1-201ENST00000494644 937 ntBASIC21.6■■□□□ 1.05
XKR3Q5GH77 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
XKR3Q5GH77 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
XKR3Q5GH77 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.6■■□□□ 1.05
XKR3Q5GH77 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
XKR3Q5GH77 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms