Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.15■□□□□ 0.34
NKX6-1P78426 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.15■□□□□ 0.34
NKX6-1P78426 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.15■□□□□ 0.34
NKX6-1P78426 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NKX6-1P78426 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.15■□□□□ 0.34
NKX6-1P78426 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NKX6-1P78426 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NKX6-1P78426 AL121829.2-201ENST00000620908 328 ntBASIC17.15■□□□□ 0.34
NKX6-1P78426 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
NKX6-1P78426 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NKX6-1P78426 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.15■□□□□ 0.34
NKX6-1P78426 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NKX6-1P78426 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
NKX6-1P78426 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NKX6-1P78426 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.14■□□□□ 0.33
NKX6-1P78426 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.14■□□□□ 0.33
NKX6-1P78426 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.14■□□□□ 0.33
NKX6-1P78426 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NKX6-1P78426 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.14■□□□□ 0.33
NKX6-1P78426 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.14■□□□□ 0.33
NKX6-1P78426 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.14■□□□□ 0.33
NKX6-1P78426 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
NKX6-1P78426 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.14■□□□□ 0.33
NKX6-1P78426 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX6-1P78426 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.14■□□□□ 0.33
NKX6-1P78426 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.13■□□□□ 0.33
NKX6-1P78426 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NKX6-1P78426 FEM1AP1-201ENST00000431297 1995 ntBASIC17.13■□□□□ 0.33
NKX6-1P78426 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NKX6-1P78426 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NKX6-1P78426 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.13■□□□□ 0.33
NKX6-1P78426 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.13■□□□□ 0.33
NKX6-1P78426 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.13■□□□□ 0.33
NKX6-1P78426 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.13■□□□□ 0.33
NKX6-1P78426 AC092865.7-201ENST00000641832 219 ntBASIC17.13■□□□□ 0.33
NKX6-1P78426 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NKX6-1P78426 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.13■□□□□ 0.33
NKX6-1P78426 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX6-1P78426 KRT16P6-202ENST00000425692 1426 ntBASIC17.13■□□□□ 0.33
NKX6-1P78426 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NKX6-1P78426 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
NKX6-1P78426 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.12■□□□□ 0.33
NKX6-1P78426 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.12■□□□□ 0.33
NKX6-1P78426 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
NKX6-1P78426 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.12■□□□□ 0.33
NKX6-1P78426 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.12■□□□□ 0.33
NKX6-1P78426 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.12■□□□□ 0.33
NKX6-1P78426 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.12■□□□□ 0.33
NKX6-1P78426 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.12■□□□□ 0.33
NKX6-1P78426 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 AC005363.2-201ENST00000618631 242 ntBASIC17.12■□□□□ 0.33
NKX6-1P78426 AL121906.2-201ENST00000621597 723 ntBASIC17.12■□□□□ 0.33
NKX6-1P78426 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.12■□□□□ 0.33
NKX6-1P78426 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NKX6-1P78426 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms