Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.13■□□□□ 0.33
LSM6P62312 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
LSM6P62312 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM6P62312 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM6P62312 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LSM6P62312 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LSM6P62312 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LSM6P62312 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LSM6P62312 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM6P62312 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM6P62312 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM6P62312 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM6P62312 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSM6P62312 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.13■□□□□ 0.33
LSM6P62312 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM6P62312 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM6P62312 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.13■□□□□ 0.33
LSM6P62312 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM6P62312 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.13■□□□□ 0.33
LSM6P62312 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LSM6P62312 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM6P62312 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM6P62312 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM6P62312 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM6P62312 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM6P62312 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LSM6P62312 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSM6P62312 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 AL032819.2-201ENST00000624543 2162 ntBASIC17.12■□□□□ 0.33
LSM6P62312 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.12■□□□□ 0.33
LSM6P62312 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LSM6P62312 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LSM6P62312 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.12■□□□□ 0.33
LSM6P62312 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 KRT18P16-201ENST00000510337 1294 ntBASIC17.12■□□□□ 0.33
LSM6P62312 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.12■□□□□ 0.33
LSM6P62312 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LSM6P62312 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LSM6P62312 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM6P62312 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.11■□□□□ 0.33
LSM6P62312 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LSM6P62312 ZNF815P-204ENST00000434898 1737 ntBASIC17.11■□□□□ 0.33
LSM6P62312 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LSM6P62312 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.11■□□□□ 0.33
LSM6P62312 BX323043.1-201ENST00000641006 1765 ntBASIC17.11■□□□□ 0.33
LSM6P62312 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.11■□□□□ 0.33
LSM6P62312 PRKY-204ENST00000533551 1019 ntBASIC17.11■□□□□ 0.33
LSM6P62312 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.11■□□□□ 0.33
LSM6P62312 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.11■□□□□ 0.33
LSM6P62312 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.11■□□□□ 0.33
LSM6P62312 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.11■□□□□ 0.33
LSM6P62312 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM6P62312 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LSM6P62312 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSM6P62312 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSM6P62312 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.1■□□□□ 0.33
LSM6P62312 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM6P62312 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM6P62312 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
LSM6P62312 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM6P62312 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM6P62312 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.1■□□□□ 0.33
LSM6P62312 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM6P62312 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
LSM6P62312 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM6P62312 TUBB8P6-201ENST00000436895 1288 ntBASIC17.1■□□□□ 0.33
LSM6P62312 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.1■□□□□ 0.33
LSM6P62312 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.1■□□□□ 0.33
LSM6P62312 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.1■□□□□ 0.33
LSM6P62312 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.1■□□□□ 0.33
LSM6P62312 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.1■□□□□ 0.33
LSM6P62312 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSM6P62312 AP003097.1-201ENST00000530657 1135 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms