Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.51■□□□□ 0.39
GFRA1P56159 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA1P56159 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA1P56159 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA1P56159 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA1P56159 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA1P56159 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.51■□□□□ 0.39
GFRA1P56159 MESTP1-201ENST00000404287 994 ntBASIC17.51■□□□□ 0.39
GFRA1P56159 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GFRA1P56159 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.51■□□□□ 0.39
GFRA1P56159 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.51■□□□□ 0.39
GFRA1P56159 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA1P56159 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.51■□□□□ 0.39
GFRA1P56159 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.51■□□□□ 0.39
GFRA1P56159 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.51■□□□□ 0.39
GFRA1P56159 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA1P56159 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.51■□□□□ 0.39
GFRA1P56159 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA1P56159 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GFRA1P56159 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA1P56159 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.51■□□□□ 0.39
GFRA1P56159 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA1P56159 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
GFRA1P56159 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA1P56159 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA1P56159 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.5■□□□□ 0.39
GFRA1P56159 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.5■□□□□ 0.39
GFRA1P56159 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA1P56159 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA1P56159 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
GFRA1P56159 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GFRA1P56159 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.5■□□□□ 0.39
GFRA1P56159 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
GFRA1P56159 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA1P56159 RBM17P1-201ENST00000453646 1190 ntBASIC17.5■□□□□ 0.39
GFRA1P56159 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.5■□□□□ 0.39
GFRA1P56159 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.5■□□□□ 0.39
GFRA1P56159 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.5■□□□□ 0.39
GFRA1P56159 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.5■□□□□ 0.39
GFRA1P56159 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA1P56159 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
GFRA1P56159 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA1P56159 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA1P56159 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA1P56159 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.5■□□□□ 0.39
GFRA1P56159 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.5■□□□□ 0.39
GFRA1P56159 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GFRA1P56159 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.5■□□□□ 0.39
GFRA1P56159 FSCN1P1-201ENST00000568912 1481 ntBASIC17.5■□□□□ 0.39
GFRA1P56159 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFRA1P56159 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GFRA1P56159 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GFRA1P56159 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.49■□□□□ 0.39
GFRA1P56159 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.49■□□□□ 0.39
GFRA1P56159 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GFRA1P56159 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GFRA1P56159 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.49■□□□□ 0.39
GFRA1P56159 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GFRA1P56159 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.49■□□□□ 0.39
GFRA1P56159 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 B3GAT3P1-201ENST00000471720 806 ntBASIC17.49■□□□□ 0.39
GFRA1P56159 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.49■□□□□ 0.39
GFRA1P56159 MIR6786-201ENST00000616843 113 ntBASIC17.49■□□□□ 0.39
GFRA1P56159 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
GFRA1P56159 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFRA1P56159 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
GFRA1P56159 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA1P56159 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
GFRA1P56159 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA1P56159 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA1P56159 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA1P56159 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.48■□□□□ 0.39
GFRA1P56159 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.48■□□□□ 0.39
GFRA1P56159 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA1P56159 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA1P56159 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.48■□□□□ 0.39
GFRA1P56159 UNC93B2-201ENST00000285383 730 ntBASIC17.48■□□□□ 0.39
GFRA1P56159 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
GFRA1P56159 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA1P56159 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
GFRA1P56159 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA1P56159 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.48■□□□□ 0.39
GFRA1P56159 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.48■□□□□ 0.39
GFRA1P56159 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA1P56159 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA1P56159 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms