Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATN1P54259 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATN1P54259 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.55■■□□□ 1.04
ATN1P54259 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATN1P54259 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ATN1P54259 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATN1P54259 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.55■■□□□ 1.04
ATN1P54259 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATN1P54259 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.55■■□□□ 1.04
ATN1P54259 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.55■■□□□ 1.04
ATN1P54259 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATN1P54259 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
ATN1P54259 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ATN1P54259 STK33P1-201ENST00000423835 1218 ntBASIC21.54■■□□□ 1.04
ATN1P54259 ATP5G2P1-201ENST00000433580 426 ntBASIC21.54■■□□□ 1.04
ATN1P54259 AC092119.3-201ENST00000612618 583 ntBASIC21.54■■□□□ 1.04
ATN1P54259 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.54■■□□□ 1.04
ATN1P54259 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.54■■□□□ 1.04
ATN1P54259 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ATN1P54259 LINC01311-201ENST00000565162 1445 ntBASIC21.54■■□□□ 1.04
ATN1P54259 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
ATN1P54259 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATN1P54259 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATN1P54259 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATN1P54259 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.53■■□□□ 1.04
ATN1P54259 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATN1P54259 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATN1P54259 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATN1P54259 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATN1P54259 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATN1P54259 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
ATN1P54259 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATN1P54259 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATN1P54259 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.53■■□□□ 1.04
ATN1P54259 TMEM179-206ENST00000616017 1645 ntBASIC21.53■■□□□ 1.04
ATN1P54259 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.53■■□□□ 1.04
ATN1P54259 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ATN1P54259 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATN1P54259 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATN1P54259 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATN1P54259 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATN1P54259 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
ATN1P54259 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.52■■□□□ 1.04
ATN1P54259 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
ATN1P54259 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ATN1P54259 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATN1P54259 CA15P1-201ENST00000481698 905 ntBASIC21.52■■□□□ 1.04
ATN1P54259 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.52■■□□□ 1.04
ATN1P54259 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.52■■□□□ 1.04
ATN1P54259 AC244517.3-201ENST00000616254 1235 ntBASIC21.52■■□□□ 1.04
ATN1P54259 HYMAI.1-201ENST00000620949 238 ntBASIC21.52■■□□□ 1.04
ATN1P54259 LINC01465-201ENST00000408887 1940 ntBASIC21.52■■□□□ 1.04
ATN1P54259 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATN1P54259 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATN1P54259 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
ATN1P54259 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
ATN1P54259 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ATN1P54259 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATN1P54259 AP000347.1-202ENST00000435868 847 ntBASIC21.51■■□□□ 1.03
ATN1P54259 AL160286.2-201ENST00000567150 934 ntBASIC21.51■■□□□ 1.03
ATN1P54259 RN7SL510P-201ENST00000581311 263 ntBASIC21.51■■□□□ 1.03
ATN1P54259 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ATN1P54259 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ATN1P54259 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.51■■□□□ 1.03
ATN1P54259 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATN1P54259 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATN1P54259 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATN1P54259 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.51■■□□□ 1.03
ATN1P54259 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.51■■□□□ 1.03
ATN1P54259 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATN1P54259 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATN1P54259 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATN1P54259 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATN1P54259 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.5■■□□□ 1.03
ATN1P54259 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATN1P54259 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATN1P54259 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATN1P54259 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATN1P54259 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.5■■□□□ 1.03
ATN1P54259 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.5■■□□□ 1.03
ATN1P54259 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.5■■□□□ 1.03
ATN1P54259 GCSHP2-201ENST00000560971 527 ntBASIC21.5■■□□□ 1.03
ATN1P54259 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.5■■□□□ 1.03
ATN1P54259 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.5■■□□□ 1.03
ATN1P54259 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
ATN1P54259 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.5■■□□□ 1.03
ATN1P54259 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATN1P54259 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATN1P54259 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATN1P54259 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATN1P54259 AL845331.1-201ENST00000424978 1190 ntBASIC21.49■■□□□ 1.03
ATN1P54259 PVRIG2P-201ENST00000435460 978 ntBASIC21.49■■□□□ 1.03
ATN1P54259 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.49■■□□□ 1.03
ATN1P54259 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.49■■□□□ 1.03
ATN1P54259 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.49■■□□□ 1.03
ATN1P54259 PRELID1P1-202ENST00000567272 903 ntBASIC21.49■■□□□ 1.03
ATN1P54259 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATN1P54259 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATN1P54259 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATN1P54259 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms